Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_3052 |
Symbol | |
ID | 3725759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3563578 |
End bp | 3565128 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637752663 |
Product | IS4 family transposase |
Protein accession | YP_358457 |
Protein GI | 77920642 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTT TCAAACCCTA CGACTACAAG CAAACCGTTA TGTTGCCGGT GGATTTCGAA CAGCAGATCC TGCCCGGCAC CTTCGAGTAT TCCCTGCACT ACCTGGTCGA CAACGAACTC GACCTGAGTA TTTTCAACAG TAAATTCAAC AACGACGAAG CCGGCCGTCC CGCCTACGAT CCGGCCATTC TGCTGAAGAT TGTGCTGCTG GCCTATTCGC GCGGGGTTAC TAGCAGTCGC AAGATCGAAG CACTGTGCCG TGAAAACGTG ATCTTTATGG CCCTGTCCGC CGACAGCCGT CCGCATTTCA CCACCATTGC CGACTTCATC TCCGGGTCTG CCAAACAGAT TGCCGATCTG TTTCATCAGG TGCTGATGGT TTGCGATGCC CTGGGGCTGA TTGGTCATGA GATGTTCGCC GTCGACGGTT GCAAGATGCC ATCGAACGCC TCCAAGGAGT GGAGCGGCAC CCACGACGAT TTGAAAAAGA AAGCCAAGAA GATCGACCGG GCCGTACGCT TTCTGCTCAA CAAGCACCGC GAAGAAGATA AAAAGGGGCC GCCCGATCCG ACCATGCGGC AGCGGGAGGA AAAGCAGAAA GAGACTCTGA CCAAGGCCAG TCGTAAGATC AAGAAGTTCC TGACCGAAAA CAAAAAACGC CAGGGTCGTC GCGGCAAGGA AGTGAAAAGC AACATCACCG ACAACGACAG CGCCAAGATG AAGACCAGCC ACGGCGTGCT TCAGGGCTAC ACTGGCGTCG CCGCGGTCGA TGCCGAGCAT CAGGTGGTGG TGCATGCCGA AGCCTTCGGT ACGGGACAGG AGCATGGGTT GCTCGAACCG ATGCTTGAGG GCATCCGCAA GGCCTTCAAC GGTAACTATC ATAACTGTGG TGACGAGATT CTTAGCGAGG CCAAAATCCT GGCCGATAGT GGTTTTCATA GCGGACAGAC TCTGGAGCAT CTGGAAGCAG AAGGCATAGA CGGCTATATC GCCGATCCTG GTTTTCGCTC CCGCGATCCC CGTTTCAAGA CCGCGTCACG TCACAAGCCC CAAGACTCCG GTGCGTCAAA GAGCCACCCA AAAAAACGCT TCAGCGTCAG CGACTTTCAG GTCGATCTTG CCAACAAGAC CTGCGCCTGT CCGGCCGGTA ACCCTCTGTG GCTCAAGTGC GCCAAAGCCA AGATCGGCGA GCGTTTATTC ATGCAATTCA TGGGCTATCA GGCTGATTGT GATCGCTGTG CAAAGCGGAG CCAATGCTTG CGAGACATCC GCCAAAAAGG AGCCCGCCAG GTCAACGTGC TGCTGGAGAC GCTATCGAGT CCCAAGATCG GCATCATCGA GCGGATGAAA CAGAAGATCG ATTCCGTGTT CGGTCGCCAC ATTTACGGGC AACGCCTGGG CATCGTCGAA CCTGTCTTTG GCAATCTGCG CGAAACGCTT GGGCTGCGAC GGTTTTCCCT GCGTGGTCGC ACCAAAGTCG ATGGGCAATG GAAATTGATG ACAATGCTCC ACAATATCGG CAAGATTCAT CGGTATGGAT GGACTTTGTA G
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Protein sequence | MARFKPYDYK QTVMLPVDFE QQILPGTFEY SLHYLVDNEL DLSIFNSKFN NDEAGRPAYD PAILLKIVLL AYSRGVTSSR KIEALCRENV IFMALSADSR PHFTTIADFI SGSAKQIADL FHQVLMVCDA LGLIGHEMFA VDGCKMPSNA SKEWSGTHDD LKKKAKKIDR AVRFLLNKHR EEDKKGPPDP TMRQREEKQK ETLTKASRKI KKFLTENKKR QGRRGKEVKS NITDNDSAKM KTSHGVLQGY TGVAAVDAEH QVVVHAEAFG TGQEHGLLEP MLEGIRKAFN GNYHNCGDEI LSEAKILADS GFHSGQTLEH LEAEGIDGYI ADPGFRSRDP RFKTASRHKP QDSGASKSHP KKRFSVSDFQ VDLANKTCAC PAGNPLWLKC AKAKIGERLF MQFMGYQADC DRCAKRSQCL RDIRQKGARQ VNVLLETLSS PKIGIIERMK QKIDSVFGRH IYGQRLGIVE PVFGNLRETL GLRRFSLRGR TKVDGQWKLM TMLHNIGKIH RYGWTL
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