Gene Pcar_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3052 
Symbol 
ID3725759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3563578 
End bp3565128 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content55% 
IMG OID637752663 
ProductIS4 family transposase 
Protein accessionYP_358457 
Protein GI77920642 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTT TCAAACCCTA CGACTACAAG CAAACCGTTA TGTTGCCGGT GGATTTCGAA 
CAGCAGATCC TGCCCGGCAC CTTCGAGTAT TCCCTGCACT ACCTGGTCGA CAACGAACTC
GACCTGAGTA TTTTCAACAG TAAATTCAAC AACGACGAAG CCGGCCGTCC CGCCTACGAT
CCGGCCATTC TGCTGAAGAT TGTGCTGCTG GCCTATTCGC GCGGGGTTAC TAGCAGTCGC
AAGATCGAAG CACTGTGCCG TGAAAACGTG ATCTTTATGG CCCTGTCCGC CGACAGCCGT
CCGCATTTCA CCACCATTGC CGACTTCATC TCCGGGTCTG CCAAACAGAT TGCCGATCTG
TTTCATCAGG TGCTGATGGT TTGCGATGCC CTGGGGCTGA TTGGTCATGA GATGTTCGCC
GTCGACGGTT GCAAGATGCC ATCGAACGCC TCCAAGGAGT GGAGCGGCAC CCACGACGAT
TTGAAAAAGA AAGCCAAGAA GATCGACCGG GCCGTACGCT TTCTGCTCAA CAAGCACCGC
GAAGAAGATA AAAAGGGGCC GCCCGATCCG ACCATGCGGC AGCGGGAGGA AAAGCAGAAA
GAGACTCTGA CCAAGGCCAG TCGTAAGATC AAGAAGTTCC TGACCGAAAA CAAAAAACGC
CAGGGTCGTC GCGGCAAGGA AGTGAAAAGC AACATCACCG ACAACGACAG CGCCAAGATG
AAGACCAGCC ACGGCGTGCT TCAGGGCTAC ACTGGCGTCG CCGCGGTCGA TGCCGAGCAT
CAGGTGGTGG TGCATGCCGA AGCCTTCGGT ACGGGACAGG AGCATGGGTT GCTCGAACCG
ATGCTTGAGG GCATCCGCAA GGCCTTCAAC GGTAACTATC ATAACTGTGG TGACGAGATT
CTTAGCGAGG CCAAAATCCT GGCCGATAGT GGTTTTCATA GCGGACAGAC TCTGGAGCAT
CTGGAAGCAG AAGGCATAGA CGGCTATATC GCCGATCCTG GTTTTCGCTC CCGCGATCCC
CGTTTCAAGA CCGCGTCACG TCACAAGCCC CAAGACTCCG GTGCGTCAAA GAGCCACCCA
AAAAAACGCT TCAGCGTCAG CGACTTTCAG GTCGATCTTG CCAACAAGAC CTGCGCCTGT
CCGGCCGGTA ACCCTCTGTG GCTCAAGTGC GCCAAAGCCA AGATCGGCGA GCGTTTATTC
ATGCAATTCA TGGGCTATCA GGCTGATTGT GATCGCTGTG CAAAGCGGAG CCAATGCTTG
CGAGACATCC GCCAAAAAGG AGCCCGCCAG GTCAACGTGC TGCTGGAGAC GCTATCGAGT
CCCAAGATCG GCATCATCGA GCGGATGAAA CAGAAGATCG ATTCCGTGTT CGGTCGCCAC
ATTTACGGGC AACGCCTGGG CATCGTCGAA CCTGTCTTTG GCAATCTGCG CGAAACGCTT
GGGCTGCGAC GGTTTTCCCT GCGTGGTCGC ACCAAAGTCG ATGGGCAATG GAAATTGATG
ACAATGCTCC ACAATATCGG CAAGATTCAT CGGTATGGAT GGACTTTGTA G
 
Protein sequence
MARFKPYDYK QTVMLPVDFE QQILPGTFEY SLHYLVDNEL DLSIFNSKFN NDEAGRPAYD 
PAILLKIVLL AYSRGVTSSR KIEALCRENV IFMALSADSR PHFTTIADFI SGSAKQIADL
FHQVLMVCDA LGLIGHEMFA VDGCKMPSNA SKEWSGTHDD LKKKAKKIDR AVRFLLNKHR
EEDKKGPPDP TMRQREEKQK ETLTKASRKI KKFLTENKKR QGRRGKEVKS NITDNDSAKM
KTSHGVLQGY TGVAAVDAEH QVVVHAEAFG TGQEHGLLEP MLEGIRKAFN GNYHNCGDEI
LSEAKILADS GFHSGQTLEH LEAEGIDGYI ADPGFRSRDP RFKTASRHKP QDSGASKSHP
KKRFSVSDFQ VDLANKTCAC PAGNPLWLKC AKAKIGERLF MQFMGYQADC DRCAKRSQCL
RDIRQKGARQ VNVLLETLSS PKIGIIERMK QKIDSVFGRH IYGQRLGIVE PVFGNLRETL
GLRRFSLRGR TKVDGQWKLM TMLHNIGKIH RYGWTL