| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3005 |
|---|
| Symbol | cysM |
|---|
| ID | 3725712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3516070 |
|---|
| End bp | 3516996 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637752616 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_358410 |
|---|
| Protein GI | 77920595 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 0.951108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC ATTGTTCCAT GGGCCTGGTG AACGCCATAG GGAATACCCC CATGGTGGAA
TTGACCCAGC TCAACACCAA TCCTGAAGTT CGTATTTTCG CCAAACTCGA AGGCAACAAT
CCCGGCGGTT CGGTCAAGGA TCGGCCGGCC TGGCATATGC TCCGCAAAGC CGAAGAATCC
GGAGAGCTGA CCAAGGGCAA AACCATCCTG GAGCCGACTT CCGGCAATAC CGGTATCGCT
CTGGCCATGA TCGGTGCGGC GAGAGGCTAC CGCGTCAAGC TGGTTATGCC CGGCTGCGTC
AGCATGGAAC GCCGGGCCGT CCTGGAAGCC TACGGTGCCG AAGTGCTGCT GTCGCCGCCG
GCCGAAGCGA CCGACGGCGC CATTCGCATG GCGCATCGCA TCCTGGAAGA AAACCCCTAC
AAATATTACA TGCCCAACCA ATATGCCAAT CCGAACAATC CCATGGCCCA TTATCACACC
ACCGGTCCGG AAATTTTTGC CCAGACCGAT GGACAGGTCG ATGTTTTTGT GGCCGGCATG
GGAACCTCCG GGACCCTTAT GGGTACTGGC CTCTATTTGA AAGAAAAGAA TCCCGCCATC
CGCATCGTCG GTGTCGAACC GGTCATCGGG CATAAGGTCC AGGGGTTGAA AAACATGAAG
GAAGCCATCG TTCCGGAAAT CTACCATCCG GAAAATCTGG ATACCAAACT CGTGATCGAT
GACGACAAGG CCTTCGAAAC GGCCCGCATG CTGGCTATCC GCGAAGGCGT GTTTGCCGGC
ATGTCCAGCG GTGCGGCGGT TGCCGGCGCC CTGGAAGTGG CGCGCGGCAT GGACAAGGGC
GTCATTGTCA CCCTGTTGCC CGACCGCGGG GACCGTTACC TGAGCACCAC CCTGTTTCGT
TCGACCTGCG CCTGCTGCCC GCCCTGA
|
|---|
| Protein sequence | MKTHCSMGLV NAIGNTPMVE LTQLNTNPEV RIFAKLEGNN PGGSVKDRPA WHMLRKAEES
GELTKGKTIL EPTSGNTGIA LAMIGAARGY RVKLVMPGCV SMERRAVLEA YGAEVLLSPP
AEATDGAIRM AHRILEENPY KYYMPNQYAN PNNPMAHYHT TGPEIFAQTD GQVDVFVAGM
GTSGTLMGTG LYLKEKNPAI RIVGVEPVIG HKVQGLKNMK EAIVPEIYHP ENLDTKLVID
DDKAFETARM LAIREGVFAG MSSGAAVAGA LEVARGMDKG VIVTLLPDRG DRYLSTTLFR
STCACCPP
|
|---|
| |