| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3003 |
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| Symbol | |
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| ID | 3725710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3512810 |
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| End bp | 3515260 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637752614 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_358408 |
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| Protein GI | 77920593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGT ATGGCTCCTA CCCTTTCAAC ACCTCGATCC GTTGCCGATT TTTCGGCTTG
CTATGCGGTC TGTTGATTCT GCTGCCCGTC CCTTTTGCCG CCGCCTCGCC GCCGGTACGC
ATCGGGGTGG TTATGGATGG CCCCTGGGAG GGTAACGCCG GGATCCTGCG TTTGTTTCAC
GAAGAAATTA ATGATCTGCT GGGGCATGAG TTCTCGATTC AGTTCCCCGA ACGGGCAAAC
CTGACCGCGG ACTGGACGCC GCTCGCTGTT CATCGCTGTA TCGATCGATT ATTGAGCGAT
CCCCAGGTGG ATATCGTGCT TGCCATCGGT ATGCTGGCAG GGCAGGACCT GGCGCGTCGC
GGCCCGCTGC CGAAACCGGG GCTGGCTCTC TTGACGACGG ATCGATCGGC CCAACGGTTG
CCGGCCAGCA ACGGCAGCAG CGGAGTGCAC AATTTCACCT ACATCGCACC GGCAACCTCT
CTGTTGCGCG ACCTGCAGCT TTTCCAGGAA CTGGTTCCGT TTCGCCATCT GACCATCCTC
AGCTATCGTC CCTATCACGA AGCAATTCCC GAAATAGCCC AAACGCTGGA AAAAAAACTT
GCCGCAGACG GTATCGAGCT GACGGTGATC CCCCTGGAGG GTCGCGTTGC ACCCGCCCTG
GCGGCGCTGC CGGTCACTAC GGACGCCGTC TATATCACAC CTTTGCTGCT CTCCGCCCCT
GAGTTTCGGA AGCTGGTCGG GACGCTCATC GAGCGCAAAC TGCCAAGCTA CTCCTATCTG
GGATATGAAG AGGTCCAGCA AGGGGTGCTG GCAGGCAGCG CACCGGCGAC CGACTTTTCC
CGTCTGGCGC GCCGCACGGC CCTTAACCTC CAGCGTATCC TGCTGGGCGA AGATGCCGCC
GATCTTCCGG CGACCATCAA CAGGGACGAA CGATTGACCG TCAACATGGC AACGGCCCGG
GCTATCGGGT TCTCACCGAC GTGGGATGCG TTGATCGAGG CCGAGCAACT CTATGCCGAA
CCGAGGGGCG CAGCGCGACG CTGGTCTCTG GAGTCGGTGG TCAGGGAAGC CGTTGCGGTA
AACCTGGATC TGGCCGCGGC CGATCGCAAG GTAGCCGCCG GCCTGGAGGA TATCCGCAAG
GCCCGCGCCA ATCTGCTGCC GCAGCTGGGT CTGTCGGCCA CCGGCCTGAT GATTGATGAC
GACCGTGCCG CAGCCAGTTT CGGCACTCAG GCCGAACGCA GTTTGAGCGC ATCTTTGGAA
TTGCAACAAT CGCTTTACTC GGAACCGGCC TGGGCCAATT TCGAGATTCA GCGGCATCAA
CAGGCAGGCC GCCAGGAGGA GTGGCGGCAA CTGCGCCTGG ATGTCATTCA GGAAGCCGCT
AGCGGCTACC TCAATGTGTT GCGCGCCAAG ACCCTGCAAA CGGTTCAAAA AAACAACCTG
CGGGTGACGC GCTCCAATCT CGACCTGGCG CGCATGCGAC GGGAAGTCGG CTTCTCCAGT
CCGGCCGAAG TCTACCGGTG GGAAAATCAA CTGGCCCGCG ACCGTCGTGC CCTGATCGAC
GCTGACGTTG CCCGGACTCA AACCGAAATC GCTCTGAACC GCACGCTGCA CCGCCCCCTG
GAAGAGGCCT TTGCCACGGC GGATCAGGGG TTGGACGATC CGGTCCTGAT TGCCAGCGAC
CCGCGCCTGT TCGCGCAGTT GGCTACCCCC GCGGCGTTTG CCCGCTTCCG TGACTTTATG
GTCGAACAGG GCCTCCGCTC ATCGCCGGAA ATAAAGCGTC TGGACGCCGC CATTGCCGCC
CAACAACGGG CCAGAACCGC GGCCCGTCGT GCCTTCTGGG TACCCGATCT GTCCTTGCAG
GCAGGTGTCA CCCAACTGCT TGGCGAAGAC GGCGAGGGGG TCGACTCACC TTTTAACCGG
TTCAAAGGCC TGCTTCCCGT CGATATTCCG GAAGCCGATG ATACCAGCTG GCATGTCGGC
CTCAAACTTT CCCTGCCGCT GTTTGCCGGG GGATCCCGCT GGGCCGAATT GGTCCAGGCC
GAACGTCAGA TCGACCGGCT TGAATTGGAA CGCAAAGCGC TCTCCGCACG CCTGGAACAG
CGCATCCGTT CCGCACTGCA GGACAGTCGC GCATCCCATG CCGGGATCCG CCTGTCCCGT
GAAGGGGCGC AAGCCGCGGC CAAAAACCTG GAATTGGTCA CCGATGCCTA TTCCCGCGGA
GTCGTTTCCA TCCTCGAATT GCTCGATGCC CAGAACGCTT CGCTGATCGC CGAACAATCC
GCGGCTAACG CGGTTTATGA TTTTCTTCTC GATTTGATGG CTGTGCAAAG GTCCCTGGGG
CAGTTCGATT TTTTCCTCAG TGCCGGCCAG CGCGAACAGT GGTTTCAACG CCTTGAGCTT
TTTCTGCAAT CCTCGCCAGC GGAATATGAC CGGATTCCCG CCACGGAGTA G
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| Protein sequence | MAKYGSYPFN TSIRCRFFGL LCGLLILLPV PFAAASPPVR IGVVMDGPWE GNAGILRLFH
EEINDLLGHE FSIQFPERAN LTADWTPLAV HRCIDRLLSD PQVDIVLAIG MLAGQDLARR
GPLPKPGLAL LTTDRSAQRL PASNGSSGVH NFTYIAPATS LLRDLQLFQE LVPFRHLTIL
SYRPYHEAIP EIAQTLEKKL AADGIELTVI PLEGRVAPAL AALPVTTDAV YITPLLLSAP
EFRKLVGTLI ERKLPSYSYL GYEEVQQGVL AGSAPATDFS RLARRTALNL QRILLGEDAA
DLPATINRDE RLTVNMATAR AIGFSPTWDA LIEAEQLYAE PRGAARRWSL ESVVREAVAV
NLDLAAADRK VAAGLEDIRK ARANLLPQLG LSATGLMIDD DRAAASFGTQ AERSLSASLE
LQQSLYSEPA WANFEIQRHQ QAGRQEEWRQ LRLDVIQEAA SGYLNVLRAK TLQTVQKNNL
RVTRSNLDLA RMRREVGFSS PAEVYRWENQ LARDRRALID ADVARTQTEI ALNRTLHRPL
EEAFATADQG LDDPVLIASD PRLFAQLATP AAFARFRDFM VEQGLRSSPE IKRLDAAIAA
QQRARTAARR AFWVPDLSLQ AGVTQLLGED GEGVDSPFNR FKGLLPVDIP EADDTSWHVG
LKLSLPLFAG GSRWAELVQA ERQIDRLELE RKALSARLEQ RIRSALQDSR ASHAGIRLSR
EGAQAAAKNL ELVTDAYSRG VVSILELLDA QNASLIAEQS AANAVYDFLL DLMAVQRSLG
QFDFFLSAGQ REQWFQRLEL FLQSSPAEYD RIPATE
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