Gene Pcar_2978 details

Gene Information

• Locus tag: Pcar_2978
• Symbol: tolQ
• ID: 3725685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 3487793
• End bp: 3488464
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637752589
• Product: TolQ protein
• Protein accession: YP_358383
• Protein GI: 77920568
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins
• TIGRFAM ID: [TIGR02796] TolQ protein

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGCTGA TTTCCGATGC CGGACTGGTG GTCAAACTGG TTCTGTTGAT ACTGATCGGT 
TTTTCTCTGC TTTCCTGGGC TATCATTTTT TTGAAGTTCC GGGTTATCTA TCGCGCCATC 
AGTGATTCGC AGCGGTTTCA ACAATTTTTC TGGAACAAAC GGCACATCGA TGCCATTGCC 
CAGAAACTGA GAGATTTCCC CCACGCGCCG ACCGCATCCC TGTTCCGGGA CGGCTATCAG 
GAAATGAAAC GCAATCAGCG GGATAACGGC ACGGATGAAC CGACCTTGTT CAGTGCCGAC 
ATGGGCCAGG CGGACAACGT CGCCCGTGCC CTGCGACGCG CCACCAATCA GGAAACGCAG 
CGTCTGGAGC GCTATCTGCC GTTTCTTGCC ACGACCGGCT CGACGGCACC CTTTATCGGT 
CTGTTCGGTA CCGTATGGGG GATCATGGAC TCGTTTCATG GCATCGGCAA AACCGGCAGC 
GCTTCGCTGG CGGTTGTCGC TCCGGGGATA TCCGAAGCCC TGGTCGCCAC TGCCATCGGT 
CTGGTGGCCG CCATCCCCGC CGTGGTTGCC TACAACCACT TTGTCAGTAA GGTTAATGTG 
CTGACCGGCG ATATGGACAG TTTCAGCCAG GAGTTCCTCA ACATCGTCGA TCGCATGCTG 
CGAAGGAGCT GA 

 

Protein sequence

MELISDAGLV VKLVLLILIG FSLLSWAIIF LKFRVIYRAI SDSQRFQQFF WNKRHIDAIA 
QKLRDFPHAP TASLFRDGYQ EMKRNQRDNG TDEPTLFSAD MGQADNVARA LRRATNQETQ 
RLERYLPFLA TTGSTAPFIG LFGTVWGIMD SFHGIGKTGS ASLAVVAPGI SEALVATAIG 
LVAAIPAVVA YNHFVSKVNV LTGDMDSFSQ EFLNIVDRML RRS