| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2975 |
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| Symbol | tolB |
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| ID | 3725682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3485148 |
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| End bp | 3486479 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637752586 |
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| Product | TolB protein |
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| Protein accession | YP_358380 |
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| Protein GI | 77920565 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.508751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTT CAACCTCAAA GACCTTATGG ATTAAAACTA TGCGCCGTTT CGTGACCCTG
CTTATCGCCC TGCTCTGCCT GTCGGCGACT GCCGTCCAGG CCCAGGTTGA AATTCGCGCT
CCTGGCCAAC AGACCATTGC CGTGGCCAAC ACCCAACTTG TCCCCCTGTC CGGAACGCCG
CTACCCGCCA TAGCCGCGGA GTTGCACGAT GTCATGGCTG CCGACCTGGA GCTGTCCGGC
CTGTTTCGCC AGCTCGACCC GGCGGCGTTT CTGGATGATG CGCGGCGTCC CGGTCTGACC
AGTTCTCGGG TCGATTTCAA TCAGTGGGCC CTTCTGGGTG CCGAAATTCT TATCAAGGGC
GGTTACCAAC TGCAAGGGGA ACGGCTGCTG GTCGATTTTC GTCTGTACGA TGTCGTTCAC
AGGCGGTTGT TGACCGGTCG CCGCTATGCG GGACTTCGAC GCGATGTGCG TACCATGGCG
CATAAATTCG CTGATCAGGT GTTGAAGAGC GTCACCGGCC GGGAAGGTCC GTTCAGTTCC
CGTATCGCTT ATATCGACAA CCGCACCGGG CACAAGGAGC TGTATCTGAT GGATACCGAC
GGCGCCAATG CCCTGCGCCT TACCGATCAC CGCTCCATTG TTCTCAATCC CGATTTTTCG
CCCAACGGAC GCGAGGTCAT TTACACCTCG TACCGGCGCG GCAATCCCGA TCTCTACCGG
AAACAGTTGA GCACCGGGCA GGAAGCCCGC CTGGCTTTTA AAAAAGGCCT GAATATAGCA
GCGCGCTTTC GGCCTGACGG TCGGGAAATT GCGCTCACCC AGTCGGCCAC CGGCAATCCC
GAACTGATGC TGCTCGGCAC CGACGGCAGT CGCCGCCGCC GTCTTACCAG TCATTGGGGT
ATCGATGTCG ATCCGAGCTG GAGCCCGGCC GGCGACCGGC TGGCTTTTGT CTCCGACCGG
CAGGGCAATC CGCATATTTT CGTCATGGAC CTGCTCGGCG GCCAGACCGC GCGACTTACC
GCTAACGGTA AATACAACGC CACTCCGGCC TGGAGTCCCG ACGGCAAGCG TATTGCCTTT
ACCCGCCTGG AAAAGGGCGT GTTTGATATC TATACCGTTC GACCCGACGG TACGGACGAA
CGCCGCCTGA CTTTCGGTCC CGGCAATAAA GAGCACCCCC GCTGGAGCCC GGACAGCCGC
TTCCTGGTCT ATTCTTCCGA TCAGGACGGC CGTAAGGGCA TTTACATCAT GCGGGCCGAT
GGCACCGGCA TACGCCGCAT CTCGGCCGGT GGCGGACAGT GCCAACACCC GGCATGGTCC
GGTCAGCGGT GA
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| Protein sequence | MSSSTSKTLW IKTMRRFVTL LIALLCLSAT AVQAQVEIRA PGQQTIAVAN TQLVPLSGTP
LPAIAAELHD VMAADLELSG LFRQLDPAAF LDDARRPGLT SSRVDFNQWA LLGAEILIKG
GYQLQGERLL VDFRLYDVVH RRLLTGRRYA GLRRDVRTMA HKFADQVLKS VTGREGPFSS
RIAYIDNRTG HKELYLMDTD GANALRLTDH RSIVLNPDFS PNGREVIYTS YRRGNPDLYR
KQLSTGQEAR LAFKKGLNIA ARFRPDGREI ALTQSATGNP ELMLLGTDGS RRRRLTSHWG
IDVDPSWSPA GDRLAFVSDR QGNPHIFVMD LLGGQTARLT ANGKYNATPA WSPDGKRIAF
TRLEKGVFDI YTVRPDGTDE RRLTFGPGNK EHPRWSPDSR FLVYSSDQDG RKGIYIMRAD
GTGIRRISAG GGQCQHPAWS GQR
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