Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2974 |
Symbol | pal |
ID | 3725681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3484411 |
End bp | 3484983 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637752585 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_358379 |
Protein GI | 77920564 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.113547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCG GAGGTATTCG GATTTCCATG CAGGTGCTGT TGATGATGAT TCTTACGGCC ATGCTGGCGG TAGGCTGTGC CAAAAAACCG GCCCCTGTAC CTGTCACCAC CGATGATCAG GCGGCAGCGC AACAGGCTGT CCAAGGTGTT GAAGAGATGG GCGCGGGAGA GACGGGCATT GGCGAAAGCA TGATTGGCGA AGAGAGCATG GACGACAGCA TGTCGATGCC GCAAACGGTT GCTTCTCTGG AACGCATCTA CTTCAATTTT GACCGTTATG ACCTGAGCCC CGAGGCGCAG GCCATTCTTA TCAACAATGC GGAATATCTC AAAGCCAACC CCGATCAGAA GGTCCGCATC GAAGGTTACT GCGATGAGCG CGGTTCGGAT GAATATAACC TGGCTCTTGG GGAGCGTCGC GCCCTGGCTG CCCAGAAGTA TCTTGAATCC CTCGGTGTTG CCGGCGATCG CCTGAGTGTG ATCTCCTATG GTGAGGAAAT GCCTCTCGAT CCGGCACAGA ACGAAGATGC CTACGCCATG AACCGGCGTG CGGAATTCAA ATCCATGCCC TGA
|
Protein sequence | MKRGGIRISM QVLLMMILTA MLAVGCAKKP APVPVTTDDQ AAAQQAVQGV EEMGAGETGI GESMIGEESM DDSMSMPQTV ASLERIYFNF DRYDLSPEAQ AILINNAEYL KANPDQKVRI EGYCDERGSD EYNLALGERR ALAAQKYLES LGVAGDRLSV ISYGEEMPLD PAQNEDAYAM NRRAEFKSMP
|
| |