Gene Pcar_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2974 
Symbolpal 
ID3725681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3484411 
End bp3484983 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID637752585 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_358379 
Protein GI77920564 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.113547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG GAGGTATTCG GATTTCCATG CAGGTGCTGT TGATGATGAT TCTTACGGCC 
ATGCTGGCGG TAGGCTGTGC CAAAAAACCG GCCCCTGTAC CTGTCACCAC CGATGATCAG
GCGGCAGCGC AACAGGCTGT CCAAGGTGTT GAAGAGATGG GCGCGGGAGA GACGGGCATT
GGCGAAAGCA TGATTGGCGA AGAGAGCATG GACGACAGCA TGTCGATGCC GCAAACGGTT
GCTTCTCTGG AACGCATCTA CTTCAATTTT GACCGTTATG ACCTGAGCCC CGAGGCGCAG
GCCATTCTTA TCAACAATGC GGAATATCTC AAAGCCAACC CCGATCAGAA GGTCCGCATC
GAAGGTTACT GCGATGAGCG CGGTTCGGAT GAATATAACC TGGCTCTTGG GGAGCGTCGC
GCCCTGGCTG CCCAGAAGTA TCTTGAATCC CTCGGTGTTG CCGGCGATCG CCTGAGTGTG
ATCTCCTATG GTGAGGAAAT GCCTCTCGAT CCGGCACAGA ACGAAGATGC CTACGCCATG
AACCGGCGTG CGGAATTCAA ATCCATGCCC TGA
 
Protein sequence
MKRGGIRISM QVLLMMILTA MLAVGCAKKP APVPVTTDDQ AAAQQAVQGV EEMGAGETGI 
GESMIGEESM DDSMSMPQTV ASLERIYFNF DRYDLSPEAQ AILINNAEYL KANPDQKVRI
EGYCDERGSD EYNLALGERR ALAAQKYLES LGVAGDRLSV ISYGEEMPLD PAQNEDAYAM
NRRAEFKSMP