Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2965 |
Symbol | |
ID | 3725672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3474114 |
End bp | 3475415 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637752576 |
Product | putative peptidase |
Protein accession | YP_358370 |
Protein GI | 77920555 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000000753312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAACC ATGCCATCAT GATCGTTTTA CTGCTCATTG TCGGCGCCGC CATCGGCTAT CTTTTCCTGC GCGATAACGC ACCCCCGCAG ATCACCCTGT CTCCCGCCAG CGGTGCCGTA TCGACCCGGA AACCGCCGGT GCTGCACCTG CAGGATTCCG ACACCGGCCT GAAATCCGTT GTCGTCAGTG TTTCCCAGGA GGGCAAAGTC ACCGAGTTGC TCAACAAAAC CTTCCAGCGC GGCATAAAGC AGGCAGAGAT TCCCTTGGCC CTGGAAAAAC TGTCTCTCAA AAACGACACG CTGCAACTCA CCGTCAAGAC CAGCGATTAC GCCACCCTGG CGAATAAAGG GGAGCAGAAT TTTACTTTTG AATACGATAC CAAACCGCCG GTGATTTCGG TTTTGACCAC CGCCCACAAC GTTTACGAAG GGGGAGTCGG TCTGACCATG TTCCGGGTCA ACGAAGATGT CAAATATGCC GGGGTCCAGG TGGCGGATCG TTTTTTCCCG GCTTACCGGC AGGATAACGG CGTCTACGCC TGCCTGTTCG CCTGGCCGCA CAATATCCGG CGCAGTGCCT TTTCACCGCG CGTGATCGTG GAGGACCAGG CGGGCAACCA GCGCACAGGC GGTTTTTACT ATCACTCCAT TCCCCGCCCG GGGCGAAGCG ACAGGATCAA TATCAGCCAG CGGTTTCTGG ACAACAAAAT GCCCGATTTT CAGCATTATT TCCCGACGGT GACCGACCCC TTGCAACTCT TTCTGCGGGT CAACAACGAA CTGCGGGCCA AAAACGTTGC CAAGCTGAAT GACCTGGCCG CGAAAACCGC CGATCGCCCC CTGTGGCAGG GCGCCTTTTT GCGGCTGCCC AATGCGGCTC CCCGCGCGGA CTTCAACGAT AAGCGCGATT ACATGTTCAA CGGCAAAAAA GTCGACCATC AGACCCACCT GGGCCTGGAC CTGGCTTCTC TGGCGGCATC TCCGGTACCG GCCAGCAACA GCGGCACGGT TATCATGGCA GAGGATTTCG GCATCTACGG CCAGTGCATC ATCATCGATC ACGGCCTCGG CCTGCAGAGC CTTTACTCCC ACCTGAGCAG CATCGACGTG GCCGTCGGTG ATCAGCTCAG CAAAGGGCAG ATCATCGGCC GCACAGGTGC CACCGGCATG GCCGGCGGCG ACCATCTGCA TTTCGGCATC GTCCTGTCCG GCCTCCAGGT CAACCCCCGC GAATGGCTTG ACGGCCACTG GATCAAAGAC AACTTTACCG ATAAGTGGCA ACGAACCATG GCCCAGCCCT GA
|
Protein sequence | MKNHAIMIVL LLIVGAAIGY LFLRDNAPPQ ITLSPASGAV STRKPPVLHL QDSDTGLKSV VVSVSQEGKV TELLNKTFQR GIKQAEIPLA LEKLSLKNDT LQLTVKTSDY ATLANKGEQN FTFEYDTKPP VISVLTTAHN VYEGGVGLTM FRVNEDVKYA GVQVADRFFP AYRQDNGVYA CLFAWPHNIR RSAFSPRVIV EDQAGNQRTG GFYYHSIPRP GRSDRINISQ RFLDNKMPDF QHYFPTVTDP LQLFLRVNNE LRAKNVAKLN DLAAKTADRP LWQGAFLRLP NAAPRADFND KRDYMFNGKK VDHQTHLGLD LASLAASPVP ASNSGTVIMA EDFGIYGQCI IIDHGLGLQS LYSHLSSIDV AVGDQLSKGQ IIGRTGATGM AGGDHLHFGI VLSGLQVNPR EWLDGHWIKD NFTDKWQRTM AQP
|
| |