Gene Pcar_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2965 
Symbol 
ID3725672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3474114 
End bp3475415 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID637752576 
Productputative peptidase 
Protein accessionYP_358370 
Protein GI77920555 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000753312 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAACC ATGCCATCAT GATCGTTTTA CTGCTCATTG TCGGCGCCGC CATCGGCTAT 
CTTTTCCTGC GCGATAACGC ACCCCCGCAG ATCACCCTGT CTCCCGCCAG CGGTGCCGTA
TCGACCCGGA AACCGCCGGT GCTGCACCTG CAGGATTCCG ACACCGGCCT GAAATCCGTT
GTCGTCAGTG TTTCCCAGGA GGGCAAAGTC ACCGAGTTGC TCAACAAAAC CTTCCAGCGC
GGCATAAAGC AGGCAGAGAT TCCCTTGGCC CTGGAAAAAC TGTCTCTCAA AAACGACACG
CTGCAACTCA CCGTCAAGAC CAGCGATTAC GCCACCCTGG CGAATAAAGG GGAGCAGAAT
TTTACTTTTG AATACGATAC CAAACCGCCG GTGATTTCGG TTTTGACCAC CGCCCACAAC
GTTTACGAAG GGGGAGTCGG TCTGACCATG TTCCGGGTCA ACGAAGATGT CAAATATGCC
GGGGTCCAGG TGGCGGATCG TTTTTTCCCG GCTTACCGGC AGGATAACGG CGTCTACGCC
TGCCTGTTCG CCTGGCCGCA CAATATCCGG CGCAGTGCCT TTTCACCGCG CGTGATCGTG
GAGGACCAGG CGGGCAACCA GCGCACAGGC GGTTTTTACT ATCACTCCAT TCCCCGCCCG
GGGCGAAGCG ACAGGATCAA TATCAGCCAG CGGTTTCTGG ACAACAAAAT GCCCGATTTT
CAGCATTATT TCCCGACGGT GACCGACCCC TTGCAACTCT TTCTGCGGGT CAACAACGAA
CTGCGGGCCA AAAACGTTGC CAAGCTGAAT GACCTGGCCG CGAAAACCGC CGATCGCCCC
CTGTGGCAGG GCGCCTTTTT GCGGCTGCCC AATGCGGCTC CCCGCGCGGA CTTCAACGAT
AAGCGCGATT ACATGTTCAA CGGCAAAAAA GTCGACCATC AGACCCACCT GGGCCTGGAC
CTGGCTTCTC TGGCGGCATC TCCGGTACCG GCCAGCAACA GCGGCACGGT TATCATGGCA
GAGGATTTCG GCATCTACGG CCAGTGCATC ATCATCGATC ACGGCCTCGG CCTGCAGAGC
CTTTACTCCC ACCTGAGCAG CATCGACGTG GCCGTCGGTG ATCAGCTCAG CAAAGGGCAG
ATCATCGGCC GCACAGGTGC CACCGGCATG GCCGGCGGCG ACCATCTGCA TTTCGGCATC
GTCCTGTCCG GCCTCCAGGT CAACCCCCGC GAATGGCTTG ACGGCCACTG GATCAAAGAC
AACTTTACCG ATAAGTGGCA ACGAACCATG GCCCAGCCCT GA
 
Protein sequence
MKNHAIMIVL LLIVGAAIGY LFLRDNAPPQ ITLSPASGAV STRKPPVLHL QDSDTGLKSV 
VVSVSQEGKV TELLNKTFQR GIKQAEIPLA LEKLSLKNDT LQLTVKTSDY ATLANKGEQN
FTFEYDTKPP VISVLTTAHN VYEGGVGLTM FRVNEDVKYA GVQVADRFFP AYRQDNGVYA
CLFAWPHNIR RSAFSPRVIV EDQAGNQRTG GFYYHSIPRP GRSDRINISQ RFLDNKMPDF
QHYFPTVTDP LQLFLRVNNE LRAKNVAKLN DLAAKTADRP LWQGAFLRLP NAAPRADFND
KRDYMFNGKK VDHQTHLGLD LASLAASPVP ASNSGTVIMA EDFGIYGQCI IIDHGLGLQS
LYSHLSSIDV AVGDQLSKGQ IIGRTGATGM AGGDHLHFGI VLSGLQVNPR EWLDGHWIKD
NFTDKWQRTM AQP