Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2961 |
Symbol | pcrA |
ID | 3725668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3470431 |
End bp | 3472467 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637752572 |
Product | ATP-dependent DNA helicase |
Protein accession | YP_358366 |
Protein GI | 77920551 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.26035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTAT CTGCTCTGAA TGAACAACAA CGTGCTGCGG TACGGCATAC GGAAGGCCCG TTGCTGTTGC TGGCCGGTGC CGGCTCGGGC AAAACCCGCG TCATCACCAG CCGCATTGCC TTTCTGCTGC AGGACCGGGG CGTACCTTCG CAAGCCATTC TCGCCGTCAC CTTCACCAAT AAAGCGGCCC GGGAAATGCG TGAACGGGTG GAAGGCATCG TCGGCCGCAA ACAGGCCAAA GGCATGGTTA TCAGCACCTT CCATGCCCTG TGCGTTCGCA TTCTCAAAGA GGATATCGAA CAGCTCGGCT ATAAAAAAAA CTTTTCCATT TATGGCGGCG CCGACCAACT GCGTCTGATT CGCGACCTGT TGCAGGAGGT CAATACCGGG CTGCGCAAGT TCGACGCCGA CCGGGTGCTA TGGCTTATCT CCGACGCCAA GAACCGTCTG ATCCCGCCCG ACCGCTTTGC CCCAACTCAC GGCGATGAAT ACGGGCCGGT GGTCGCCACC ATCTATCCCC GTTACCAACG TGCTTTAAAA GCCTTCAACG CCGTCGATTT CGATGACCTG ATCATGCTGA CGGTACGTCT TCTGCAGGAC AAACCGGCGG TCCTGGAAAA ATACCGCCAG CGCTTCCGCT ACCTGATGGT CGACGAATAC CAGGACACCA ATGCCGCCCA GTACCGACTC CTGCGGCTGT TAGCTGAAGG ACACCGTAAC CTCTGCGTGG TCGGGGACGA CGACCAGTCC ATCTACGGCT GGCGAGGCGC CGATCTGGGC AATATCCTCG ATTTCGAAAA AGATTTTCCC GGCACTATGG TGATTCGCCT GGAACAGAAC TACCGTTCCA CCGGCAATAT CCTGACCGCA GCCAACGCGG TGATCCGTAA CAATCTCAAG CGCAAGATCA AGGCCTTATG GACCGCCGAC GGACCGGGCG ACAAAATCGA CTATCTGCTG TGCGAGGATG ACGAGGACGA AGCCAGGGTC GTCGTGGAAC GCATCATGGC CGAACGATTC AAGGCCCGAC TGAGTTACCG CGACTTTGCC ATTCTGTTCC GTACCAACGT TCAATCGCGC GCTTTTGAAG AACAGCTGCG CTACCAGGAC GTGCCCTATG TACTCATCGG CGGCCAGCAA TTTTTCGATC GCAAGGAGGT CAAGGATGTG CTGGCCTATT TCCGGGTGCT GCTCAACCCC CGTGACGAAG TCAATCTGCT GCGCATCCTC AACACGCCCA AGCGCGGTAT CGGCGACACC AGTGCCGACC GCCTGATCCG TTTTTCCGCC GAGCATGATA TTCCGCTGTG GCAGGTTCTG AAAAACCCCG CAGAGGTCGA AGGGCTGGGC GACAAGGTTA TGGAATCCAT CGCAACCTTC GTGGACCTGA TGCAGAACTT CCGGCGCCGG TTCCGTGTCG GCCAGCTCAG CGATACGGGC CGCGAATTAC TCCAGGAACT GCGGTTTGAA GACGATTTGT TGCGCACCGC CCAGGATCCG GACAAGGCGC GGCGACGCAT GGCCAACGTC GCCGAGGTCA TCAACGCCAT GGCTTCTTAC GAACAGCGCG AAGTGCAGCC GACCCTGGAA GGGTTCCTCG ACAAGGTATC GCTGCTCGAC CGGGACGAAC CGCCGCGTCA GGACAAAGAT GCCAAACTGC AGCGCGACGC CGTCGTGCTG ATGAGTCTGC ACTCCAGCAA GGGGCTCGAA TTTCCCTGCG TGTTTCTGGT CGGCATGGAG GATGAGCTAT TGCCGCACAA AAAATCGAAG GGCGCAAACT CCAATATCGA AGAGGAACGC CGTCTCTGCT ATGTCGGCAT CACCCGAGCG CAGAAAAAAC TGACACTGCT TGGAGCCGCC CGCAGGAAAA AATTCGGCGT CATGCAACTC CGTTCACCCA GCTGTTTTCT CGAAGAGATT CCCGACGAGG TTCTGCATTC AGCCGCCAGC GACGCACCGA CAGCAACCAC CGAGGAAGAA AAAGATCAAT TGGCAAACAA CGCTTTTGCC GATATAAAGG CCATGTTGGA CTTTTGA
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Protein sequence | MDLSALNEQQ RAAVRHTEGP LLLLAGAGSG KTRVITSRIA FLLQDRGVPS QAILAVTFTN KAAREMRERV EGIVGRKQAK GMVISTFHAL CVRILKEDIE QLGYKKNFSI YGGADQLRLI RDLLQEVNTG LRKFDADRVL WLISDAKNRL IPPDRFAPTH GDEYGPVVAT IYPRYQRALK AFNAVDFDDL IMLTVRLLQD KPAVLEKYRQ RFRYLMVDEY QDTNAAQYRL LRLLAEGHRN LCVVGDDDQS IYGWRGADLG NILDFEKDFP GTMVIRLEQN YRSTGNILTA ANAVIRNNLK RKIKALWTAD GPGDKIDYLL CEDDEDEARV VVERIMAERF KARLSYRDFA ILFRTNVQSR AFEEQLRYQD VPYVLIGGQQ FFDRKEVKDV LAYFRVLLNP RDEVNLLRIL NTPKRGIGDT SADRLIRFSA EHDIPLWQVL KNPAEVEGLG DKVMESIATF VDLMQNFRRR FRVGQLSDTG RELLQELRFE DDLLRTAQDP DKARRRMANV AEVINAMASY EQREVQPTLE GFLDKVSLLD RDEPPRQDKD AKLQRDAVVL MSLHSSKGLE FPCVFLVGME DELLPHKKSK GANSNIEEER RLCYVGITRA QKKLTLLGAA RRKKFGVMQL RSPSCFLEEI PDEVLHSAAS DAPTATTEEE KDQLANNAFA DIKAMLDF
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