| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2927 |
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| Symbol | hsdM |
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| ID | 3725633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3420025 |
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| End bp | 3421539 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637752537 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_358332 |
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| Protein GI | 77920517 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAT TGTCAATACA GTCACAAAAT ATCGATATAT CATCCCTCTC CGGGCATCTC
TGGCAGGCGG CCAATATCCT GCGCGGTCCT GTCGACGCGG CCGACTTCAA GACTTACATC
TTCCCGCTGC TGTTCTTCAA GCGGCTCTCC GACGTCTATG ACGAAGAGTA TGCCGCTGCC
CTGGAAGAGT CCGACGGCGA CGTGGAATTT GCCCAGTTCC CCGAAAATCA CCGGTTCCAG
GTTCCGGAGA ACTGCCATTG GAAGGATGCC CGAGCCAAGA GCGCCAATAT CGGCCATGCG
CTCCAGAAGG CCATGCGCTG TATCGAGCAG GCCAATCCGG ACACCCTGCA CGGCATCTTC
GGCGATGCCC AGTGGACGAA CAAGGAGCGC CTTTCGGACG CGCTGCTCAA GGACCTGCTC
GAACATTTTT CGTCGCTCAA CCTGGGCAAT GAGCATTGCA AGGCGGACAT TCTCGGACAG
GCCTATGAAT ACCTGATCAA GAAATTTGCC GACCTGACCA ACAAGAAGGC CGGTGAATTC
TATACCCCGC GTTCCGTGGT CGCGCTGATG GTTCGCATCC TTGCGCCCAA GGCGGGGGAA
ACCATCTATG ACCCGGCCTG CGGGACCGGC GGCATGCTCC TCGAGGCCCT GCACCATGTC
AAAGAGCATG GCGGTGACGA GCACCTCATG CTGGGCAAGC TCTACGGCCA GGAAAAGAAC
CTGACCACAT CCTCTATCGC CAGGATGAAC CTCTTTCTCC ACGGCGCGGA AGATTTCCAT
ATCGAACGCG GCGACACGCT GCGCTTACCC GCTTTTTATT CAGGCGACAG TCTCGCTACC
TTTGACTGCG TCATCGCCAA TCCTCCGTTC TCCCTTAAAA AATGGGGGGA CGACGCCTGG
ACCAACGATC CCTACGGCCG CAACTTTGCC GGGCTGCCGC CAGCCAAATC CGGCGACTTC
GCCTGGGTTC AACACATGGT CAAATCCATG GCCCGCAAGA CCGGCCGCAT GGCTGTGGTG
CTTCCCCATG GTGTGCTGTT CCGCATGTCC AAGGAAGGAA AAATCCGGCA CAAGCTGCTG
GAAATGGATA TCCTCGAAGC GGTGATCGGC CTCGGGAAGA ATATCTTCTA CGGCACCGGA
CTCGCGCCCT GCGTGCTGGT CTTCCGGGAC AGCAAGCCCA AGGATCACCG CCAGAAGGTG
CTGTTCATCG ACGCCTCGAA GGAGTTCAAG ACCGGGCGCG CCCAGAATGA GCTTCTGCCG
GAACACGTGG ACAACATCCA TCGCTGGTAC GAGGACTATC AGGATGTGGA AGGGATCTGC
CGGGTGGTCA CGCTCGACGA AATCCGCGAG AACGATTTCA ACCTGACCAT CCCCCGTTAC
GTGGAGCCGG TGATTGAAGA AGAATCGATA ACCATCGATC GGGCCATCGC CAATCTCAAA
GAAGCGCTGC AGGCGGCGTG TGCGGCCGAG GATCGGCTGA AGGCGCTGCT CGAAAAAGAA
GGATTGATGG CATGA
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| Protein sequence | MKSLSIQSQN IDISSLSGHL WQAANILRGP VDAADFKTYI FPLLFFKRLS DVYDEEYAAA
LEESDGDVEF AQFPENHRFQ VPENCHWKDA RAKSANIGHA LQKAMRCIEQ ANPDTLHGIF
GDAQWTNKER LSDALLKDLL EHFSSLNLGN EHCKADILGQ AYEYLIKKFA DLTNKKAGEF
YTPRSVVALM VRILAPKAGE TIYDPACGTG GMLLEALHHV KEHGGDEHLM LGKLYGQEKN
LTTSSIARMN LFLHGAEDFH IERGDTLRLP AFYSGDSLAT FDCVIANPPF SLKKWGDDAW
TNDPYGRNFA GLPPAKSGDF AWVQHMVKSM ARKTGRMAVV LPHGVLFRMS KEGKIRHKLL
EMDILEAVIG LGKNIFYGTG LAPCVLVFRD SKPKDHRQKV LFIDASKEFK TGRAQNELLP
EHVDNIHRWY EDYQDVEGIC RVVTLDEIRE NDFNLTIPRY VEPVIEEESI TIDRAIANLK
EALQAACAAE DRLKALLEKE GLMA
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