| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2923 |
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| Symbol | |
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| ID | 3725629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3413541 |
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| End bp | 3416495 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637752533 |
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| Product | R (restriction) subunit/helicase |
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| Protein accession | YP_358328 |
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| Protein GI | 77920513 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACG AAGAAAACAC TGTCGAACAG ATGGCTCTCG ACATGCTCTG TGGCGGCGTG
ATTTCGAACA TGGTTGCCGA AGAGCTCGCC AGTTACGGCG GCGAGATCAA AGGCTGGCGT
TTCGTGGCCG CCGAGGAGCT GCCGCGCCAG CACTCCGACG TGCTGGTGGA GTCGATGGTG
CGCGACGCCC TCATCCGCCT GAACCCGGAA ATCAAGGCCC AGCCCGACCG TGCCGACGAG
GTGCTCTATC GTCTGCGGAC CATCCCGCTG TCGGTGCAGA GCGAAGGCCT GGTGCGGGCC
AACGAGCTGT TTGCCGAATG GCTGCGGGGC GAGAAATCCA TGCCTTTCGG TGAACGCGGC
GAACATACGC CGGTGCGCTT GATCGACTTC GAGAATCTCA GCAACAACGA TTACGTGGTT
ACCAACCAGT GGGTCTATCC GGTCAAAGAA GGCGGTCGCC GTTTCGACAT TGTCATGCTG
GTCAACGGTA TCCCGCTGGT GGTCGGCGAG GCCAAAACGC CGGTGCGCCC GGCGGTGACC
TGGGTGGACG GAGCCAGCGA CATCCACAAC GGCTACGAAC AGAGCGTGCC GCAGATGTTT
GTGCCCAACG TCCTCTCTTT TGCCACCGAG GGCAAGAGCT ATCGGTACGG CTCGGTGCGC
ATGCCCATCG ATATCTGGGG GCCGTGGCAC GAAGGCGAGA ACAAGGCCGA GGGGACGCTT
GCAGACGTGC AGCGCTCCAT CCGCTCCATG CTGTGCCCCC ATGTGGTGCT AGACATTCTG
CAGAACTTCA CTCTGTTCGC CACCGACAAG AAGCACCGGC GCATCAAGAT CATCTGCCGC
TATCAGCAGT ACGAAGGCGC TAACCTGATG GTGGCCCGCG TGGTCAAGGG CTATCCCAAG
AAGGGCCTGA TCTGGCATTT CCAAGGCTCA GGCAAATCGC TGCTGATGGT GTTCGCGGCG
CAGAAGCTGC GGATGCATCG TAAGCTCGGC AACCCCACGG TAATGATCGT GGTGGACCGC
ATCGACCTGG ATACCCAGAT CACCGCCACC TTCAATGCCG CCGATATCCC GAACATGATC
GGAGCCGCCA CCCGGCAGGA GCTGCAAAGC CTACTGGCGG CCGATACCCG CAAGATCATC
ATCACTACCA TTCATAAATT CGGCGAGGCG GACGGCCGCC TGAATGAGCG CTCGAACATC
ATCGTGATGG TGGACGAGGC GCACCGTACA CAGGAAGGCG ATCTGGGGCG CAAGATGCGC
GACGCGCTGC CCAACGCCTT TCTCTTTGGT CTGACCGGCA CGCCGATCAA CAAGCGGGAC
CGCAACACCT TTTGGGCCTT CGGCGCGGAT GAGGATGAAC AGGGCTATAT GAGCCGCTAC
TCGTTCCAGG ACTCGATCCG GGACAAGGCC ACGCTGCCGC TGCACTTCGA GGCGGTGGAC
GTGAAGCTGC ACATCAACAA GGACGCCATC GACGAAGCCT ACTCTCAGAT GACCGATGAG
CTGAGCGAGT TGGATCGTGA TGACCTGGCC AAGCGGGCCG CCAAGATGGC GGTGCTGATT
AAGGCCCCGG CGCGGGTGAA CGCCATCTGC CAGCACATTG TTAAGCACTT CCAGGAGAAG
GTGGAGCCGA ACGGCTTCAA AGCCCAAGTG GTGACCTTTG ACCGGGAGTG CTGTGTTCTC
TACAAGAAGG CTATGGATGA GCTGGTCGGC CCAGAGGCCA GCGCCATCGT CATGCACACC
CAGGGTGGCA AGTCCGATGA GTACGCGGAA TGGAAACTGA CCAAAGACGA GGAGGAAAAG
CTTCTCGACC GTTTCCGCGA TCCGAACGAT CCGCTTAAGT TCCTGATCGT CACTTCCAAG
CTACTGACCG GCTTCGATGC GCCCATTCTG CAGGTGATGT ACCTCGACAA GCCGATGAAG
GATCACAACC TGCTGCAGGC CATCTGCCGC ACCAACCGTG TCTACCCCGG CAAGACCCAC
GGCCTGATCG TGGATTACCT GGGCATCTTC GATGATGTGG CCACGGCCCT CGATTTCGAT
GAAAAGGCGG TGCAGAAGGT CATCACCAAT CTGGATGACC TCAAGAAAGA GCTGCCCGGC
GTTGTGGCGA AGAGCCTTTC GTTCTTCCCT GGCGTGGACC GCACCGTCGG TGGCTACGAA
GGGCTGATCG CGGCGCAGGA TTGTCTGCCG GATAACGAGA CCCGGGACAA GTTCGCGGCC
GAATACTCGG TGCTCTCCTG TTTGTGGGAG GCGCTGTCTC CCGATCCCTG TCTCGGCCCT
TATGAAAAGG ACTATAAATG GCTGACCCAG GTGTATGAGT CGGTGAAGCC GCCGAGCGGC
AACGGCAAGC TGCTCTGGCA CGCCCTGGGG GCCAAGACCA TCGAGCTGGT GCATAAAAAC
GTACATCTGG AGACAGTGCG CGACGATCTG GACACCCTGG TGATGGACGC CGAGGTACTC
GAAGGGCTGC TTGATGCCAA GGACCCGGAC AAGAAATCCA AGGAAATCGA GATTAAGCTC
ATCGCCCGCC TGCGCAAGCA CAAGGACAAT CCAAAGTTTG TCGCCCTGGG TGAACGTCTC
GAAAAGCTCA AAGAGCGGCA CGAACAGGGC CTGCTCCACA GCCTCGACTT CCTAAAGGAA
CTGCTGACCC TGGCCAAGGA GGTTGTCCAG GCCGAGAAGC AGGTGGACCC GGTCGATGAA
CAGGCCAAAG CCAAGGCGGC CTTGACCGAG CTGTTCGCCG AGGTGAAGAG CGGTAAGACG
CCAGTGGTTG TCGAGCGGGT CGTCAACGAC ATCGACGAGA TTGTGCGGAT GGTTCGGTTC
CCCGGCTGGC AAAACACCCA TGCTGGGGAG CGCGAGGTCC AGAAGGCCCT GCGCAAAGTG
ATTTATGTGA AATACCAGGT CAAGGACCAG GATCTGTTCG ACAAGGCGTA CAGTTATGTT
AAACAATATT ATTGA
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| Protein sequence | MFNEENTVEQ MALDMLCGGV ISNMVAEELA SYGGEIKGWR FVAAEELPRQ HSDVLVESMV
RDALIRLNPE IKAQPDRADE VLYRLRTIPL SVQSEGLVRA NELFAEWLRG EKSMPFGERG
EHTPVRLIDF ENLSNNDYVV TNQWVYPVKE GGRRFDIVML VNGIPLVVGE AKTPVRPAVT
WVDGASDIHN GYEQSVPQMF VPNVLSFATE GKSYRYGSVR MPIDIWGPWH EGENKAEGTL
ADVQRSIRSM LCPHVVLDIL QNFTLFATDK KHRRIKIICR YQQYEGANLM VARVVKGYPK
KGLIWHFQGS GKSLLMVFAA QKLRMHRKLG NPTVMIVVDR IDLDTQITAT FNAADIPNMI
GAATRQELQS LLAADTRKII ITTIHKFGEA DGRLNERSNI IVMVDEAHRT QEGDLGRKMR
DALPNAFLFG LTGTPINKRD RNTFWAFGAD EDEQGYMSRY SFQDSIRDKA TLPLHFEAVD
VKLHINKDAI DEAYSQMTDE LSELDRDDLA KRAAKMAVLI KAPARVNAIC QHIVKHFQEK
VEPNGFKAQV VTFDRECCVL YKKAMDELVG PEASAIVMHT QGGKSDEYAE WKLTKDEEEK
LLDRFRDPND PLKFLIVTSK LLTGFDAPIL QVMYLDKPMK DHNLLQAICR TNRVYPGKTH
GLIVDYLGIF DDVATALDFD EKAVQKVITN LDDLKKELPG VVAKSLSFFP GVDRTVGGYE
GLIAAQDCLP DNETRDKFAA EYSVLSCLWE ALSPDPCLGP YEKDYKWLTQ VYESVKPPSG
NGKLLWHALG AKTIELVHKN VHLETVRDDL DTLVMDAEVL EGLLDAKDPD KKSKEIEIKL
IARLRKHKDN PKFVALGERL EKLKERHEQG LLHSLDFLKE LLTLAKEVVQ AEKQVDPVDE
QAKAKAALTE LFAEVKSGKT PVVVERVVND IDEIVRMVRF PGWQNTHAGE REVQKALRKV
IYVKYQVKDQ DLFDKAYSYV KQYY
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