Gene Pcar_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2814 
Symbol 
ID3725519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3284003 
End bp3284530 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content50% 
IMG OID637752423 
Producthypothetical protein 
Protein accessionYP_358219 
Protein GI77920404 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA GTTACCAAAA GGAAATCCCT AAGGCCCGTA TCAATTTAGC GCTGGATGTT 
GAAACCGGGG GTCACCAGAA AAAGACGGAA CTTCCCTTGA AAATGCTGGT GATGGGGGAT
TTCAGCAACG GCAAAACCAA GGGGAAAATA GCCGACCGAC AGCGGATCAA CATCAACAAG
AACAATTTCG AATCGGTCAT GGCCGATCTC GCTCCGAGTG TCCGCTTCGA CGTACCGAAT
CTGTTGGCCA AGGACGGCAG CGATTTTTCC ATCGATCTCG CCTTTCAGTC GATGAAGGAT
TTCCGCCCGG ACAGCGTAGC GCATCAGATT CCCGAGATGC ACAGCCTGAT GGCGATGCGA
AATCTGCTAA AGGATCTAAA ATCGAACCTG CTGGACAACG CCAAGTTTCG CAAGAAGCTG
GAAAAGATCG TCAGCAACCA GCCTCAACTG GAAGGTTTGA AGCAGCAATT GGAAAAGTTG
CTGGATGATT CCAATGAAAC GTCCAACCTG GAAATCCGCA GCTACTAA
 
Protein sequence
MSDSYQKEIP KARINLALDV ETGGHQKKTE LPLKMLVMGD FSNGKTKGKI ADRQRININK 
NNFESVMADL APSVRFDVPN LLAKDGSDFS IDLAFQSMKD FRPDSVAHQI PEMHSLMAMR
NLLKDLKSNL LDNAKFRKKL EKIVSNQPQL EGLKQQLEKL LDDSNETSNL EIRSY