Gene Pcar_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2794 
Symbol 
ID3725499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3261236 
End bp3263062 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content59% 
IMG OID637752403 
Productchloride channel protein EriC 
Protein accessionYP_358199 
Protein GI77920384 
COG category[K] Transcription
[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000831422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACACGA CGAGTCGTAT CATGCCGCAC AGCGTACTTA CTTCAGAGGC TATCGATTGG 
ATCAGGGAAC GTGTCCCGGC TTTTTTAAGC CGTCTGGGGA TCAGCGAGCA TACTTTCATG
GCGCTGCTTG CACTGGGCGT GGGCGTGATG TCGGGGCTTG GGAACTTCAT CTTTCGAAAG
ACCATCGACC TGATCCATTT GCTGGTGATA GAGCAGGGGG TGCGATTCTT TCACATATCC
TTTGAACAGT GGAGTGCCGC GCGGTTCTGG TCGGTGCTGT TTCCGGTTAC CGCCGGGGTG
TTGATGATCC CTTTCGGGCT TTTCTTTGCC AAGGACCTGC GATTCGGTTT TTCCCATTTT
CTCGAGCGGG TCAACCTGCG GGGGGCCAAA ATCCCCGGTC GCACCATTGT GACCCGCGGG
CTGGCCAGCG CCATCACGCT GGGCGCGGGC GGTTCGGCCG GGCAGGAAGG CCCCATTGCC
CAGATCGGCG GTGCTATCGG CAGTCAGGTC GGCCAGCTTT TCAAGGTCAG TGGCGAGCGC
CTGAAGCTGC TGGTGGCTTG CGGGGTTGCC GGGGGCATCG CCGCGACTTT CAATGCGCCC
ATCGCCGGGG TGTTTTTCGC CCACGAAATC GTACTGCTGT CGTCCTTTGA ACTGACCAGT
TTTACCTCCA TCGTCATATC GAGCGGTATC GCAACGGTGG TTTCCCGCGC CCTGCTGGGC
AATATGCCGG CTTTGCGGGC TCCGGTCCAC ATGCTGGCGC ATCCCTGGGA GCTGGCTTTT
TATCTGGTGC TCGGCATGCT GGTCGGGGTG TTGGCGGTAG GCTTCACTAC CGCTCATTAC
CGTATCGTCG ATCGCCTCGC CGCCCTGAAG GTGCACCGCC TGGTCAAACC GATAGTCGGG
GGCGCCCTGG TCGGTATCAT CGGCATCTTC TTCCCCCAGG TGTTCGGCAA CGGCTACGAA
TTTATCGAAA ACGTGTTGCT GGGCGAGGGC GTGCTGTTGT TGTTGGGCTG CCTGGTGCTG
GCCAAGGCCC TGGCGACTTC GCTGACTCTC GGTTCCGGGT TGCCGGGCGG CATGTTTGCA
CCGTCGCTGT TCATCGGCGC CGTGACCGGC GGCGCGTATG GCAAAGCGTT GCAGATACTT
TTCCCCGGCA CGGTGCCGGC CACCGGTCCC TACGCCCTGG TGGGAATGGG GGCGTTTCTG
GCCGCCGCCA CCCATGCGCC AATGACGGCT ATTTTTCTGT TGTTCGAGAT GACCGGCAGC
TACGATCTCA TCATTCCCAT CATGTTGTGC TGCGTGGTCG GTACCGCCAT CAGCCGGCAC
CTCAAAAAAG ACAGCCTCGA TACCGTCGAG CTGTCCCGGG CCGGCATTAA TCTGGAGGCG
GGCAAAGAAC GTAATATCAT GAAGTCCCTG CGGGTCGGCG ACGTTATGAC CCGCGATCCC
GAGTCGATTC CCGAAAACAT GACGTTGCGG CAATTCAACC AGTTTATTGC CAGTACCAAA
CATACCAATT TCCCTCTCAT CAATCGCAAT GGAGGCTTGA CCGGCATTAT CTCGGTGCAG
GACTTCCTGG GCGTGGTATT CGAAGGCGAT CTGTTCGACC TGGTGGTGGT CAAGGAGTTG
GCCACTCTCG ATGTGGTTAC CGTCAGTACC GGGGACAACC TCGACCAGGC CATGCGCAAG
ATCGGATATC GCAACATCGA ACAGTTGCCG GTGGTCGATG AGCGCAACGG GCGCAAGCTG
ATCGGTATTG TCAGCCGGCG GGATATGGTG TCGGCCTACA ACCGGGCCCT CATGGTGCGC
TCCATGGAGG ACGATGACGA TGAGTGA
 
Protein sequence
MHTTSRIMPH SVLTSEAIDW IRERVPAFLS RLGISEHTFM ALLALGVGVM SGLGNFIFRK 
TIDLIHLLVI EQGVRFFHIS FEQWSAARFW SVLFPVTAGV LMIPFGLFFA KDLRFGFSHF
LERVNLRGAK IPGRTIVTRG LASAITLGAG GSAGQEGPIA QIGGAIGSQV GQLFKVSGER
LKLLVACGVA GGIAATFNAP IAGVFFAHEI VLLSSFELTS FTSIVISSGI ATVVSRALLG
NMPALRAPVH MLAHPWELAF YLVLGMLVGV LAVGFTTAHY RIVDRLAALK VHRLVKPIVG
GALVGIIGIF FPQVFGNGYE FIENVLLGEG VLLLLGCLVL AKALATSLTL GSGLPGGMFA
PSLFIGAVTG GAYGKALQIL FPGTVPATGP YALVGMGAFL AAATHAPMTA IFLLFEMTGS
YDLIIPIMLC CVVGTAISRH LKKDSLDTVE LSRAGINLEA GKERNIMKSL RVGDVMTRDP
ESIPENMTLR QFNQFIASTK HTNFPLINRN GGLTGIISVQ DFLGVVFEGD LFDLVVVKEL
ATLDVVTVST GDNLDQAMRK IGYRNIEQLP VVDERNGRKL IGIVSRRDMV SAYNRALMVR
SMEDDDDE