Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2692 |
Symbol | prfA |
ID | 3725397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3144351 |
End bp | 3145421 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637752302 |
Product | peptide chain release factor 1 |
Protein accession | YP_358098 |
Protein GI | 77920283 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.000179951 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTTA ACAAGCTCGA AGAAGTGGAA GATCGGTTTC GTGAAGTCGA GGGGCTGCTG TCGGACCCGC AGGTCGTGTC GCAGCAGAAA CGTTTTCTCG AGTTGACGCG CGAACATGCC GAACTGTCGT CGGTAGTCGC GGTTTATCGC GAATACAAAC GGGTAAGCGA AGATATCGAG GGGAACCGCG AGTTGCTGCA GGATAGCGAC CCTGAAATGC GGGAGATGGC CAAGGCGGAG CTGCCCGAAC TCGAGGCTCA TCGTGAAGAA CTGGCTCAGC AGCTTAAGGT TCTGCTGTTG CCTAAAGATC CCAACGACGA CAAGAACGTT ATCCTTGAAA TCAGGGCAGG TACCGGTGGC GACGAAGCGG CACTGTTTGC CGGCGACCTG TTCCGCATGT ACAGCCGTTT TGCCGAGGGG CAGGGTTGGA AAGTCGAGAC CATGAGCGTT TCGGACTCCG AAGCCGGCGG ATTCAAGGAA ATTATCGCCA TGATCAGCGG CAACCGGGTG TATTCGCAAC TCAAATACGA GAGCGGCACC CATCGGGTGC AACGGGTGCC GGAGACGGAG GCCCAGGGGC GTATCCACAC CTCGGCCTGC ACGGTGGCGG TGTTGCCCGA GGCTGAAGAC GTTGATGTGG ATATCGATCC GACCGATCTG CGCATTGATG TTTACCGCGC CTCCGGCGCC GGAGGGCAGC ACGTCAATAA AACCGAATCG GCGGTGCGTA TTACGCATGT GCCCACCGGA GTGGTGGTTT CCTGCCAGGA CGAAAAATCC CAGCATAAAA ACAAGGCCAA AGCCATGAAG GTGCTGAAGT CCCGCATCCT GGATCAGGTG ATGGCCGATC AGCAGGCGCA GATGGCCGCC GATCGCAAAA GCCAGGTCGG TAGCGGCGAT CGCAGTCAGC GTATCCGTAC CTACAACTTC CCCCAGGGGC GTTGCACCGA TCACCGCATC GGTTTGACGC TCTATCGGCT GGAAGGCATC ATGCAGGGCA ATCTCTCCGA GTTGGTCGAA CCCCTCACCC TGCATTATCA GAGTGAGGCC ATGGCGGCCC AGGAGGCGTA A
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Protein sequence | MIFNKLEEVE DRFREVEGLL SDPQVVSQQK RFLELTREHA ELSSVVAVYR EYKRVSEDIE GNRELLQDSD PEMREMAKAE LPELEAHREE LAQQLKVLLL PKDPNDDKNV ILEIRAGTGG DEAALFAGDL FRMYSRFAEG QGWKVETMSV SDSEAGGFKE IIAMISGNRV YSQLKYESGT HRVQRVPETE AQGRIHTSAC TVAVLPEAED VDVDIDPTDL RIDVYRASGA GGQHVNKTES AVRITHVPTG VVVSCQDEKS QHKNKAKAMK VLKSRILDQV MADQQAQMAA DRKSQVGSGD RSQRIRTYNF PQGRCTDHRI GLTLYRLEGI MQGNLSELVE PLTLHYQSEA MAAQEA
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