Gene Pcar_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2613 
SymboldnaQ 
ID3725316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3065004 
End bp3065672 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID637752224 
ProductDNA polymerase III subunit 
Protein accessionYP_358021 
Protein GI77920206 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTTTAG AAAATATACA GCAGCAGGTG GCTGGGTGTG ATACTCGCGA GGGCGTCGTG 
GTGCTCGATT TCGAGACCAG CGGCATGTCG CCCGTGCAGG GTGACCGGGC CATCGAAATC
GGCGCTGTGC GCATCGTGGG TGGGCAAATC GCCGACCGGT TTCAGAGCTT GATGAACCCG
GGATGTCGGA TCAGTAGCTT TATCGAGAGT TTTACCGGCA TCAGTAACGC CATGGTGCAG
GCCGCCCCGC CCGCCACGCA GGTCATGGCA GCTTTTCACG ATTTTATCGG TGATGCGCCG
CTGGTCGCGC ACAATGCGTC TTTTGACCGG CGTTTCCTCG ATGCCGAACT GCAGCGTATC
GACCGTTGCC GGCGGCAGGA GTTCGCCTGT TCTCTGCTGG TGGCTCGCCG TGTCTACCCC
GATTCGCCCA ACCATAAGCT GGCTACCCTG GTGTCCTATA AGGGGCTGCC TACCGACGGT
TGTTTTCACC GGGCGCTGGC CGATGCGGAA ATGACCGCTC ATCTGTGGCT GCGCATGGCG
GCGGACCTTC AGGATGCCTA CGGTTTTTCC CAGGTGCCGT TTGCCTTGAT GAGCGCATTG
GCAAGACAGA AAAAAAATCG GGTGGCTGCG TTTTTGCGGG AACGGGCGCT GGAGATGCGG
GGAATGTAA
 
Protein sequence
MSLENIQQQV AGCDTREGVV VLDFETSGMS PVQGDRAIEI GAVRIVGGQI ADRFQSLMNP 
GCRISSFIES FTGISNAMVQ AAPPATQVMA AFHDFIGDAP LVAHNASFDR RFLDAELQRI
DRCRRQEFAC SLLVARRVYP DSPNHKLATL VSYKGLPTDG CFHRALADAE MTAHLWLRMA
ADLQDAYGFS QVPFALMSAL ARQKKNRVAA FLRERALEMR GM