| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2594 |
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| Symbol | rfbD |
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| ID | 3725297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3044474 |
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| End bp | 3045418 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752205 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_358002 |
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| Protein GI | 77920187 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 72 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAATC AAAAACGCCG GGTGGCCATT GTCGGTGCCA GAGGAATGCT CGCCCGCATG
GTGCTGCGAT CGGCGCCGTC CGAGTGGGAC ATTGTCGCCC TTAGCCACCC CCAATTCGAC
TTGACCGACC GGGCCTCCGC CAGGATGGGG CTGAGTGCCT TTCAGCCTGA TGTCATCATC
AACTGCGCGG CCTACACCGA CGTGGATGGT GCGGAATCAA ACGAAGCTCT TGCTTTTTCG
GTAAATGCCG TTGGCCCTGG AAATCTGGCA CAGGTCGCCA AAGAGCTCAA CGCAACCCTG
GTGCACTTCT CTTCCGACTA TGTTTTCGGC GGCGACAAAA CAGCCCCTTA CCGCGAGACC
GACTGTCCGG ACCCCCGGTC GATTTACGGC AAATCGAAGC TCCAGGGCGA ACAGCTGATA
CAGGACAGCG GCCTGGAGCG ATTCTTTATC GTCCGCACCA GCTGGCTGTA TGGTCCCGGC
GGGAAAAATT TTGTCGAATC CATGATCCGG TTGGCGCAAC AACGCGAAGA ATTGCGTATC
GTGGCAGACC AGTTCGGTTC GCCCACCTAC ACAGCCGACT TGACGCAGGC TGCGCTAAAC
CTCCTTGCCG AGGAAACAAC GGACACCAGG AAAAAGCGCA CCCCAGATCC CCTTTATGGC
ATTTACCATT ACGCCAACGA GGGGCAATGC AGTTGGCACC GGTTTGCGGA AGAGATCGTA
TCGCTGCTGA AAACCAACGG AGAAACCATT AAAGCGAAGC TCATTCTCCC TATTCCCACA
ACGGCATACC CCTTGCCGGC ACCCCGCCCA TCCTATTCCG TGTTATCCAA AGCAAAGTAC
CGAAAGACTA CCGGCGCCAT CGTCCCCAAC TGGCGCCAGG CACTGGCTCG GTATATGGCA
AACCGGCTGA ATTCTCAAAG CCACCCCCAA GGCGGAAGCC CTTAA
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| Protein sequence | MPNQKRRVAI VGARGMLARM VLRSAPSEWD IVALSHPQFD LTDRASARMG LSAFQPDVII
NCAAYTDVDG AESNEALAFS VNAVGPGNLA QVAKELNATL VHFSSDYVFG GDKTAPYRET
DCPDPRSIYG KSKLQGEQLI QDSGLERFFI VRTSWLYGPG GKNFVESMIR LAQQREELRI
VADQFGSPTY TADLTQAALN LLAEETTDTR KKRTPDPLYG IYHYANEGQC SWHRFAEEIV
SLLKTNGETI KAKLILPIPT TAYPLPAPRP SYSVLSKAKY RKTTGAIVPN WRQALARYMA
NRLNSQSHPQ GGSP
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