| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2584 |
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| Symbol | cafA |
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| ID | 3725287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3031637 |
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| End bp | 3033148 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637752195 |
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| Product | RNase EG |
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| Protein accession | YP_357992 |
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| Protein GI | 77920177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000000677215 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAG ATCTGGTCAT CAATACCACA TCCCACGAAA CGCGCGTGGC TTTGCTCGAA
AACGGCCATA TCGCCGAGTT GTACATCGAG CGCACCCGCG AACGGGGGAT CGTCGGAAAC
ATTTATAAAG GTAAGGTGCT GCGGGTGCTT CCCGGTATGC AGGCCGCGTT TGTCGATATC
GGTCTGGAAA AGGCCGCATT CCTGTATGTT GCCGACGTGC TCGATCAAAT GCAGGCCCTG
GAACGATTTA TCGACGAAGG GGAGAATGAA AACGGTTTGC CGGATGAGGA AGGCCGGGAC
TCGGCTGCCC TGCCGCCTAT CGAGGATCTG CTGAAGGAGG GCCAGGAAGT GCTGGTGCAG
GTCTCCAAGG AGCCCATCGG CACCAAAGGC GCCCGGATTA CCGCCCATAT TTCACTGCCT
GGACGGCACC TGGTGTATAT GCCCACCGTC GACCATGTGG GCATTTCCCG ACGTATCGAA
AATGAGGAGG AAAAAGAGCG GCTGCGCGAA CTTATCGAAG AGATGCGTTC CCCTGGATCC
GGTTTTATCG TGCGTACCGC CGCCGAAGGC AAGAGTGCCG AGGATATGCG CTCCGATATG
GAGTTTCTGG CCGGGCTGTG GAACGGCATC TGTTCCCTGC GTGACCATAA AGGCGCGCCT
TGTCTGATCT ATTCGGATCT TGATGTGACC AGCAAGGTGC TGCGGGATAT CCTTACCGAA
GATGTGCGGC GGATTGTGGT CGACTCTTCG CGCGAGTATG ACAAGATTGT TCGTTTCATC
GAAACCTTCA TGCCCAAGCT CACCTATGTT ATCGAGCTGT ACGAAGGCGA CGAGCCTGTG
TTCGACGCCT TCGGGCTGGA AGTGGAGATC GATCGGGCGC TGGGGCGCAA GGTCTGGCTC
AAGAGCGGCG GTTATATCAT CATCGAGCAG ACCGAGGCGC TGACCGCCAT CGATATTAAT
ACCGGGCGTT TCGTCGGCAA GCATAATCTC GAGGATACGA TCCTCAAGAC CAATCTTGAA
GCGGTCAAGG AGGTTGCCTA TCAGTTGCGT TTGCGCAATA TCGGCGGCCT TATCATTATC
GATTTTATCG ATATGGAAAA AGAGGCGCAT CGCGAGAAGG TCTACGTGGC GCTCGAAGAA
GCTCTCAAAG GGGATCGGGC CAAGACCAAT ATCTTGAAAA TCTCCGAATT GGGATTGGTC
GAGATGACCC GCAAACGCGT GCGCGAAAAC CTGACCCGCA CCTTGTGCGA ACCCTGCCCT
TATTGCGAAG GCAAGGGGTA CGTCAAGAGT CGCTCGACCA TGGTCTACGA GATTTTCCGG
GAGCTGCGGC GCGAGATCCG CAATCTTGCG GGGGCGCAGG TGACGCTGTT GGTGCACCCA
AGTATCGCAT CGGTGATCTG TGATGAGGAA CGCTGGGAGA TCGACGATCT GGAACAGGCC
TACGGCAAGC AGATCGCGAT TACGGCCCGG TTTGATTTTC ACCAGGAACA GTTTGAGATT
CTTTGCAACT AA
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| Protein sequence | MTKDLVINTT SHETRVALLE NGHIAELYIE RTRERGIVGN IYKGKVLRVL PGMQAAFVDI
GLEKAAFLYV ADVLDQMQAL ERFIDEGENE NGLPDEEGRD SAALPPIEDL LKEGQEVLVQ
VSKEPIGTKG ARITAHISLP GRHLVYMPTV DHVGISRRIE NEEEKERLRE LIEEMRSPGS
GFIVRTAAEG KSAEDMRSDM EFLAGLWNGI CSLRDHKGAP CLIYSDLDVT SKVLRDILTE
DVRRIVVDSS REYDKIVRFI ETFMPKLTYV IELYEGDEPV FDAFGLEVEI DRALGRKVWL
KSGGYIIIEQ TEALTAIDIN TGRFVGKHNL EDTILKTNLE AVKEVAYQLR LRNIGGLIII
DFIDMEKEAH REKVYVALEE ALKGDRAKTN ILKISELGLV EMTRKRVREN LTRTLCEPCP
YCEGKGYVKS RSTMVYEIFR ELRREIRNLA GAQVTLLVHP SIASVICDEE RWEIDDLEQA
YGKQIAITAR FDFHQEQFEI LCN
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