| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2572 |
|---|
| Symbol | |
|---|
| ID | 3725275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3020871 |
|---|
| End bp | 3021569 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637752183 |
|---|
| Product | putative endonuclease |
|---|
| Protein accession | YP_357980 |
|---|
| Protein GI | 77920165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATT TTCGCCAAAA TACGGATAGC CGTCAGCGGC CCGCTGTTTT AAAGGATACG
CTGCTCTTTT TATGCAACCG GTTGGCGGAG CATTTCGGTC CGCTGCACTG GTGGCCGGCC
GACTCACCCT TTGAGGTGGT GATCGGTGCG TTTCTCACGC AAAATACGGC TTGGCGCAAC
GTGGAACTCG CCATCGCCGC TCTTAAAAAG ACCATCCCTC TGACGCCGCA GGCGCTTTGC
GCCTTACAAC GGCAAGACCT GGAAGAGTTG ATCCGGCCGG CGGGATTTTT CCGGCAGAAG
GCGCAGCGGC TGCAGCTGTT CGCCACATGT CTGCTGGAAA AGCATCAGGG CGATCTGGAT
GCCATGCTCA GCGGCCCCTT GTCGCAGGTC CGGCAAACCT TGCTTACCTT TAAGGGCATC
GGGCCCGAAA CCGCCGATTC CATTTTGCTG TACGCCGGCC ATCGCCCGTC GTTTGTCGTG
GATGCCTATA CCCGGCGTCT GTTCAAGCGC TATGGTGTGC TGGAGGGCGA TGAAACCTAT
GAGGACATAC GTGCCTTGTT CATGGCGCAT CTGCCTCGGC AGGTCGATCT GTTCAACGAA
TACCATGCAC TGATCGTCGA GCAGTGCAAA ACCTTTTGTC GCAAGCGCCC GCTTTGCGAA
AATTGCCCCC TACAGCCGGA ATGCCCGGTT TTGCTCTGA
|
|---|
| Protein sequence | MTHFRQNTDS RQRPAVLKDT LLFLCNRLAE HFGPLHWWPA DSPFEVVIGA FLTQNTAWRN
VELAIAALKK TIPLTPQALC ALQRQDLEEL IRPAGFFRQK AQRLQLFATC LLEKHQGDLD
AMLSGPLSQV RQTLLTFKGI GPETADSILL YAGHRPSFVV DAYTRRLFKR YGVLEGDETY
EDIRALFMAH LPRQVDLFNE YHALIVEQCK TFCRKRPLCE NCPLQPECPV LL
|
|---|
| |