| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2516 |
|---|
| Symbol | |
|---|
| ID | 3725218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2960731 |
|---|
| End bp | 2961207 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637752126 |
|---|
| Product | putative acyl-CoA hydrolase |
|---|
| Protein accession | YP_357924 |
|---|
| Protein GI | 77920109 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATC AGGTCAAAAC GGTTTCGCAA ACGAGGGTCG TACTGGCACA GGTCGCCATG
CCCGGAGACG CGAATCCGGC CGGCAACGTC CACGGTGGCA CGATCATGAA ACTCATCGAC
AATGCCGCCG GCGTCGTCGC CATGCGCCAT ACCCGCCGCA ACGTCGTGAC CGCCTCCATC
GACAGGCTTG ACTTTCATTA CCCTGTCTTC GTCGGCAACC TGATTATCCT AAAAGCCTGC
CTCAACCGAG TCGGCAAGAC CTCCATGGAG GTCGGCGTCA GAGTTGAGGC CGAAAATGTC
ATGACGGGAG AGATTCGGCA CACGGCATCT GCCTACCTGA CCTTCGTTGC CCTGGATGCC
GATGGATATC CTACAAATGT ACCTGAATTG ATCAGCGAAA CACTGGAAGA CAAGCGTCGC
CTGGCCGAGG CCGTGGAACG CTACGAGCGT AGAAGATGCA CAAACTGCAG GCGGTGA
|
|---|
| Protein sequence | MPNQVKTVSQ TRVVLAQVAM PGDANPAGNV HGGTIMKLID NAAGVVAMRH TRRNVVTASI
DRLDFHYPVF VGNLIILKAC LNRVGKTSME VGVRVEAENV MTGEIRHTAS AYLTFVALDA
DGYPTNVPEL ISETLEDKRR LAEAVERYER RRCTNCRR
|
|---|
| |