Gene Pcar_2502 details

Gene Information

• Locus tag: Pcar_2502
• Symbol: hyd
• ID: 3725204
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2941359
• End bp: 2943155
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637752113
• Product: iron-containing hydrogenase, Hyd gamma
• Protein accession: YP_357911
• Protein GI: 77920096
• COG category: [C] Energy production and conversion; [R] General function prediction only
• COG ID: [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); [COG4624] Iron only hydrogenase large subunit, C-terminal domain
• TIGRFAM ID: [TIGR02512] hydrogenases, Fe-only

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGGAA CCATCAACGG AAAACTCGTG GAATTTGGGG CAGACGAGAC CATTCTCCAG 
ACCGCGAGAC GTTACGATAT GTTTATTCCC ACCCTTTGCG AGCTGGAGAA TCTCGACCAC 
ACGCCCGGCA CCTGCCGCGT CTGTCTGGTG GAGATCAAGC GCAAGGGGGA TGACTTCACC 
CAGATCGTGA CCTCGTGCAA TACGCCTATG GAGGAGGGTA TTGAGGTGCA GACTCGTAGT 
CGCAAGGTGC GCGAGCAGCA GCGTCTTCAG GTGAATCTGC TGCTCACCGA TCATGAAGAG 
GACTGTGCCA CATGCGTGCG CCACGGCGAC TGTGAACTGC AGGACGTGGC CCAGTTTGTG 
GGCCTGAAAG AGGCGCGCTT CAAGTACGAC TTTTCAGGGG GCCGTACCAA GGATATCAGC 
TCGCCGTCGG TGATCCGCGA CATGACCAAG TGCATCCGCT GTGGACGATG TGTGACTATC 
TGCCGCGAAG TACAGGGCAC GGACGTGCTG TTCTATGCGA ACAAGGGCGT CGACTCCGAG 
ATAGGCGTGC GCGACAGCGA TCTTTTGAAC ACGTCGGATT GCGTGAGCTG CGGCCAGTGC 
ACCCTGGTCT GTCCTGTGGG AGCCCTGGCC GAAAGGGATG ATACCGAAGA GGTGATTGAC 
TACCTCAACG ATCCCGAGAT GTTCACCGTG GTTCAGTTCG CTCCAGCCAC CCGCGTGGCA 
CTGGGCGAGG AGTTCAACAT GAAACCCGGC AGCAATGTGG AGGGCCAGAT GATCACCGCC 
TTCCGCAAGA TGGGGGCCGA TGTGGTGCTG GACACAAACT TCACGGCCGA CGTGGTTATC 
ATGGAAGAGG GCAGCGAACT GCTTCACCGC GTGAAAGAGG GCGGCACCCT GCCCCTACTC 
ACATCATGCT CCCCCGGCTG GATCAACTAC GTGGAGAAAT TCTATCCCGA TATGATCTGC 
AATCTCTCCA CCACCAAGTC GCCTCAGCAG TGTCTGGGCG CCATCGCCAA GACCTATCTG 
GCCGAGAAGA TGGCAATTGA TCCGGCCAAG ATGCGCGTCA TCTCCATCAT GCCCTGCACG 
GCCAAGAAGG AAGAGGCTAA GCGTCCTGAA TTCACTATCG GAGACCGTCC TGAGGTGGAT 
GTGGTGCTCA CCACCCGCGA GCTTGGCTCG CTGCTGAAAC GGGAAGGCAT CTGGTTGCCC 
GATCTGGAGG AGGGGAATTT CGACAATCCC TGGATGGGCG TGGCCACGGG CGCGGCCGAG 
ATCTTCGGCT CCACCGGTGG TGTGATGGAG GCGGCCGTGC GCACCGTGCA CTACATCGTC 
ACGGGCGAGG AAATCCCCGG CGTGGACCTG AAAGCTGTGC GCGGCCTGGA GGGCATCCGT 
GAAGCCAGCG TGGATCTGGG CGAGCTGGGT ACTGTGAACG TGGCCATTGC CAACAGTCTG 
AAGTCCGCAA GGGAGTTGTT GGAACGCGTG CGCAGCGGCG AGAAGGAGTA CCATTTCATC 
GAGGTCATGG CCTGCCCCGG CGGCTGTATG GGAGGCGGAG GTCAGCCCAA GCACAAGCGC 
AACTACCGAG AATTCCTCAC GGCGCGTCAG AAGGCCATCT ACGACATCGA CGCTGGCAGC 
GAACTGCGCC AGTCCCACCG CAATCCTTTG GTGAAAGAGA TGTACGACAG CTATTTCGGC 
GAACCCTACT CGTCCGAGCG GTCGCATAAA TATCTTCACA CCACCTATAC GGACAAGAAG 
CGGGTGGTGA AACACACCAT TAAGGAAATC TGGGACGAGC TTTCGGAAGG CCGGTAG 

 

Protein sequence

MQGTINGKLV EFGADETILQ TARRYDMFIP TLCELENLDH TPGTCRVCLV EIKRKGDDFT 
QIVTSCNTPM EEGIEVQTRS RKVREQQRLQ VNLLLTDHEE DCATCVRHGD CELQDVAQFV 
GLKEARFKYD FSGGRTKDIS SPSVIRDMTK CIRCGRCVTI CREVQGTDVL FYANKGVDSE 
IGVRDSDLLN TSDCVSCGQC TLVCPVGALA ERDDTEEVID YLNDPEMFTV VQFAPATRVA 
LGEEFNMKPG SNVEGQMITA FRKMGADVVL DTNFTADVVI MEEGSELLHR VKEGGTLPLL 
TSCSPGWINY VEKFYPDMIC NLSTTKSPQQ CLGAIAKTYL AEKMAIDPAK MRVISIMPCT 
AKKEEAKRPE FTIGDRPEVD VVLTTRELGS LLKREGIWLP DLEEGNFDNP WMGVATGAAE 
IFGSTGGVME AAVRTVHYIV TGEEIPGVDL KAVRGLEGIR EASVDLGELG TVNVAIANSL 
KSARELLERV RSGEKEYHFI EVMACPGGCM GGGGQPKHKR NYREFLTARQ KAIYDIDAGS 
ELRQSHRNPL VKEMYDSYFG EPYSSERSHK YLHTTYTDKK RVVKHTIKEI WDELSEGR