| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2420 |
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| Symbol | lysA |
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| ID | 3725122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2847352 |
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| End bp | 2848605 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637752031 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_357829 |
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| Protein GI | 77920014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1.04804e-17 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACT TTCAATACCG CGACAACGAC CTTTTTTGTG AAGATGTCGC CCTTAAGGAT
ATCGCCGCTC AGGTCGGCAC GCCCTTCTAT GTTTATTCCC ATGCGACCCT CAGTCGCCAT
CTGGAAGCAT TTTCCTCGGC CTTTGCCGAC GTGCCTCACC TGATCTGTTA TTCCATCAAG
GCCAACAGCA ACCTGGCGGT GCTGAAAACC TTCGTCAGCC ACAATGCCGG CTTCGACATC
GTCTCCGGTG GCGAACTGTT CCGTGCCCAG CAAGTCGGTT GCGATCCCGC CAAAATCGTC
TACTCCGGCG TGGGTAAAAC CGAAGCGGAA ATCGCCGATG CGCTGCAGGC GGGCATCCTG
ATGTTCAATG TCGAGTCGCG ACAGGAGCTC GATACCATCA ATGCCGTGGC CGGACGGCTC
GGCAAAAAAG CCGGCATCGC CATCCGCGTC AACCCCGACG TCGATCCGCA GACCCACCCC
TACATCTCCA CGGGTATGAA AAAGGCCAAG TTCGGCATCA ACATCTCCCA GGCCCTGGAC
GATTACCGCC TTGCGGCCAG CCTGCCGAAC CTCGAGGTCA TTGGCGTGGA CTGCCACATC
GGCAGCCAGT TGACCAAGCT GTCGCCCTTC GTCGATGCCA TCGCAAAAAT TCGCGAACTG
GTGCAGACCC TGCAGAACGA AGGTTTCGGC ATCAAATACC TCGATCTGGG CGGCGGCCTC
GGCATCACCT ACGAGGAAGA AGAGCCCCCC AGCCCCGCCG ATTATGCCGA AGTCATCATC
GAAGGCACCA AAGGCCTGGG CGTTACCCTG GTTTTTGAAC CGGGCCGCGT CATGGTCGGC
AATGCCGGCA TGCTGGTTTC CAAAGTCCTG TATGTCAAAG AAGGCGAAGC CAAAAACTTC
GTGATCGTCG ATGCCGCCAT GAATGATCTC ACCCGCCCGG CGCTGTATGG CTCGTACCAG
GGCATTCAGG CGGTGGATCG TTCCACTTCC GACACCATCG TCGCCGACGT GGTCGGCCCG
ATCTGCGAAT CGGGAGACTT TCTCGCCCAG GATCGGGAGA TCACCGCATT TTCCCAGGGC
GACTTGCTGG CGGTCGCTTC GGCTGGAGCC TACGGCTTTA CCATGAGTTC GAATTACAAC
AGCCGCCGGC GGGTACCGGA GATCATGGTG AAAGGTGACC AGGTCATGGT CATCCGCAAA
CGTGAAACCT ACGACGACCT GATCAAAGGC GAAAGCATCC CGGAAGGACT GTAA
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| Protein sequence | MNYFQYRDND LFCEDVALKD IAAQVGTPFY VYSHATLSRH LEAFSSAFAD VPHLICYSIK
ANSNLAVLKT FVSHNAGFDI VSGGELFRAQ QVGCDPAKIV YSGVGKTEAE IADALQAGIL
MFNVESRQEL DTINAVAGRL GKKAGIAIRV NPDVDPQTHP YISTGMKKAK FGINISQALD
DYRLAASLPN LEVIGVDCHI GSQLTKLSPF VDAIAKIREL VQTLQNEGFG IKYLDLGGGL
GITYEEEEPP SPADYAEVII EGTKGLGVTL VFEPGRVMVG NAGMLVSKVL YVKEGEAKNF
VIVDAAMNDL TRPALYGSYQ GIQAVDRSTS DTIVADVVGP ICESGDFLAQ DREITAFSQG
DLLAVASAGA YGFTMSSNYN SRRRVPEIMV KGDQVMVIRK RETYDDLIKG ESIPEGL
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