Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2383 |
Symbol | |
ID | 3725085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2807094 |
End bp | 2807831 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637751994 |
Product | TPR domain-containing protein |
Protein accession | YP_357792 |
Protein GI | 77919977 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1.28487e-21 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA TCATTGCTTT TTTATCCGTT GCCTGTTTGC TGACGGCCTG CTCGACGGCC ACCGTCCCCG AAGCGAAAAC TGCCGAGGAA TATTTCAATC GGGGTGAGTT GGCTTTCGCC AACGAGGATT ACCAGGATGC CATCAAGTCC TACGAAAAGG CGATGGAGAT CTACGAAACC GCCGCTTTGA ATCGTCGGGC GGAACTGCGC ATAGCCGATG CGCACTTTGC GAACAAAGAT TATGTGGAGG CGGCGGCCGG CTACGAAGAC TTTTTGAAAC GCCACCCGGG GACGCCACAG TCGGCACGCG TTCTTTTTCA ACTGGGCGAA TCCTATTTCA ACCAGATTCT GGCCATCGAC CGCGACCAGA CTGCAACCCG CAATGCCCTG GTAACCTTCG AGAGCCTGAT CAAAATCTAT CCCGACGCTC CCGAAAGCCG CATCGCCCCG GAAAGAGTTC GGGCCTGCAA AAACCATCTG GCCGCCAACG AACTGTACGT CGGTCTTTTT TATTATAAAT TCGAAAAGCA CAAAGCGGCC ATCGGGCGTC TTACCGAAAT GCTGGATAAA TACCCCGAGT GCCCCGACAA AGACCAGGTC TACTACTACC TGGGGCGTAC ATTTCTGGAT AGCGGCCACC CCAATCTCGC CGTTGCCACT TTTGAAAATC TGATCGCCGA TTTTCCACGC AGCCCGCTCG CTGCTGAGGC GAAAACTATT CTGCGTGAGG AATTCTGA
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Protein sequence | MKFIIAFLSV ACLLTACSTA TVPEAKTAEE YFNRGELAFA NEDYQDAIKS YEKAMEIYET AALNRRAELR IADAHFANKD YVEAAAGYED FLKRHPGTPQ SARVLFQLGE SYFNQILAID RDQTATRNAL VTFESLIKIY PDAPESRIAP ERVRACKNHL AANELYVGLF YYKFEKHKAA IGRLTEMLDK YPECPDKDQV YYYLGRTFLD SGHPNLAVAT FENLIADFPR SPLAAEAKTI LREEF
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