| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2379 |
|---|
| Symbol | xth |
|---|
| ID | 3725081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2802191 |
|---|
| End bp | 2803021 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637751990 |
|---|
| Product | exonuclease III |
|---|
| Protein accession | YP_357788 |
|---|
| Protein GI | 77919973 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 2.88562e-19 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TTTCGTTCAA TGTGAACGGC ATCCGTGCCC GTTTGCATCA GTTGCGGGCT
GTCATTGACA ACCATTCGCC GGAAATCATC GGGGTGCAGG AAACCAAAGT CACCGATGCG
GATTTTCCGG TGGATGCGAT TCGCGAACTG GGATACCACG TGGAATACCA CGGACAGAAA
AGCCATTACG GAGTTGCACT GTTGTCGCGG CAGGCTCCGG TGCAGGTGGT CAAAGGCTTG
CCGGGGGATG CTCAGGATGC CCAGCGACGA CTGATCGGTG CCGCCTATGA GACCGAACAT
GGGGAGCCGC TTTGGGTATT CAACGCTTAT TTCCCCCAGG GCGAGTCACG GCAACATCCG
ACAAAGTATC CCGGCAAGGA ACGTTTTTAC CGGGAACTTG GCGATTTCCT GGAAAGCAGG
TTTTCACCCG AGGCTGACCT GATTGTTATG GGAGACGCCA ACGTGGCATT TCGGGATGAG
GATATCGGTA TAGGTCAAGA CAACGCCAAG CGCTGGCTGC GCACCGGGAA ATGCAGTTTT
CTTCCCGAGG AGCGGGACTG GCTGCGGCGG CTGTTCGATT GGGGACTGGT CGATACCTTC
CGGCAAAGTC GGTCCGATGC CGCGGAACTG TTCAGCTGGT TCGATTATCG CAGCCGCGGT
TTTGAAAAGG ATCCCCGCAG AGGCCTGCGC ATCGATCTGA TTCTGGCCAC TCAGGTTCTA
AGTCGTCGAT GCTCGGGGAG CGGTATCGAC TACGGGATTC GCGGTATGGA GAAACCCTCC
GACCATTGCC CCATCTGGGC CGAAGTGGAT TTGAGCCTGG CCGGGATATG A
|
|---|
| Protein sequence | MKIVSFNVNG IRARLHQLRA VIDNHSPEII GVQETKVTDA DFPVDAIREL GYHVEYHGQK
SHYGVALLSR QAPVQVVKGL PGDAQDAQRR LIGAAYETEH GEPLWVFNAY FPQGESRQHP
TKYPGKERFY RELGDFLESR FSPEADLIVM GDANVAFRDE DIGIGQDNAK RWLRTGKCSF
LPEERDWLRR LFDWGLVDTF RQSRSDAAEL FSWFDYRSRG FEKDPRRGLR IDLILATQVL
SRRCSGSGID YGIRGMEKPS DHCPIWAEVD LSLAGI
|
|---|
| |