| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2333 |
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| Symbol | ugpQ |
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| ID | 3725025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2729294 |
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| End bp | 2730019 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637751934 |
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| Product | glycerophosphodiester phosphodiesterase, cytosolic |
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| Protein accession | YP_357742 |
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| Protein GI | 77919927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000000000111179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TCGTTGTATG GGCTCACCGC GGTGCCTCAG GCAAGGCTCC GGAAAACACC
CTGGCCGCCT TTCGGCTTGC GCAGCGGTTC GGGGCGGACG GTGTCGAACT CGATGTGCGG
CTGACCGCCG ACGGCGTACC GGTGGTCATG CACGATGATA CTCTGGATCG GACCACTGAC
GTTAACGGGG AGTTACACAC CTTTTCTCTG GCGGATTTGC AGTCCGTCGA CGCCGGCAGT
TGGTTTGCGC CCCGATATGC AGGGGAACCG ATACCCACCC TCGATCAGGT TTTGCGTTGG
GCCGGAAGCT ATTTTCGGCT TAATCTTGAA ATCAAGGAGT TTGCGGCAGG GATGGCCGTT
GTGGGGTTGT TGGAGCGTTT TCCCGGTTGC CGTGCGCTCG TGTCGTCCTT TGATTATGCG
TTACTCGAAG CTTTGCGCCG TAAGGCTACC TGGTTGCCTG TCGGATTTTT AAGTGCACAG
CGACACTGGG TCGAAAGCAT CGATGATGCC GTGGCGTGCG GCGCCGAAAG TTTTCATCCC
CGCCAGGATC TAGTATTGCC GGAGCAGGTC AGGCTTTGCC ATGCACGGGG GTTGAAGGTG
TATCCCTGGG TTGTCGATGA TCGCCAGCGT TTCAAGGCGT TGCTTGATAT GGGCGTCGAC
GGTCTGTTTA CCAATGATCC GGGTCAGGTA TGTCGTTGGC GAGACCACTC CGCACCTGCA
GGCTGA
|
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| Protein sequence | MKKIVVWAHR GASGKAPENT LAAFRLAQRF GADGVELDVR LTADGVPVVM HDDTLDRTTD
VNGELHTFSL ADLQSVDAGS WFAPRYAGEP IPTLDQVLRW AGSYFRLNLE IKEFAAGMAV
VGLLERFPGC RALVSSFDYA LLEALRRKAT WLPVGFLSAQ RHWVESIDDA VACGAESFHP
RQDLVLPEQV RLCHARGLKV YPWVVDDRQR FKALLDMGVD GLFTNDPGQV CRWRDHSAPA
G
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