Gene Pcar_2321 details

Gene Information

• Locus tag: Pcar_2321
• Symbol: deoC
• ID: 3725013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2714363
• End bp: 2715028
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637751922
• Product: deoxyribose-phosphate aldolase
• Protein accession: YP_357730
• Protein GI: 77919915
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0274] Deoxyribose-phosphate aldolase
• TIGRFAM ID: [TIGR00126] deoxyribose-phosphate aldolase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.000020157
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAATCTC CTGCCCCATA TATCGATCAT ACTCTGTTGA AAGCCGATGC GACTTCCGCG 
CAGATCAGGC AATTGTGTCT CGAGGCGGCT CACTGGCAGT TCGCTTCGGT CTGTATTCCG 
CCACGCTTTG TGTCCGAGGC GGTAGCATGT CTGGCCGATA GTCAGGTCGC CGTTGGAACC 
GTTGTCGGTT TTCCTTTGGG ATACGACACC GCTGCAGTCA AACGTGCCGC CACCGCACAG 
GCGGTTGCCG AAGGGGTTGA CGAGATCGAC ATGGTCATCC CCTTGGGAGC GGCGCTCGAG 
GGCCGTCTGG ATATGGTTCG GGAGGATGTG ATTGGTGTGT TGGATGCCGC TGCCGGTCGC 
CTTGTAAAGG TTATTATCGA ATGCTGTTAC CTCGAGAACG CAAGGAAGGT CGAACTGGTG 
GAGTTGCTGG CTGAAGCGGG AGCAGACTAT GTGAAAACCT CCACGGGATT TGCCGTGTCG 
GGTGCTGCCG AGGCCGATAT CCGGCTTCTG CACCAGGCGG CCGGGGGGCG CATAAAAGTC 
AAGGCTGCCG GCGGGGTCAG GGATTGGGAG ACCTGTCGGA TAATGCTCAA GGCAGGTGCG 
CATCGCGTCG GAACCAGTAA TGGCGTGCAG ATTATACAGC AATGGCAGGA GGCGCCGGAA 
TTATGA 

 

Protein sequence

MKSPAPYIDH TLLKADATSA QIRQLCLEAA HWQFASVCIP PRFVSEAVAC LADSQVAVGT 
VVGFPLGYDT AAVKRAATAQ AVAEGVDEID MVIPLGAALE GRLDMVREDV IGVLDAAAGR 
LVKVIIECCY LENARKVELV ELLAEAGADY VKTSTGFAVS GAAEADIRLL HQAAGGRIKV 
KAAGGVRDWE TCRIMLKAGA HRVGTSNGVQ IIQQWQEAPE L