Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2283 |
Symbol | serB |
ID | 3724975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2665161 |
End bp | 2666357 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637751884 |
Product | 3-phosphoserine phosphatase |
Protein accession | YP_357692 |
Protein GI | 77919877 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0560] Phosphoserine phosphatase [COG3830] ACT domain-containing protein |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000000752134 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGATA AAATGGTGCT GGTCACCATG ACCGGTCCGG ATCAGGCCGG TATCATTTCA GCCGTGGCCG GATGTATTGC CGAAGCGGGT GCGCGCATTC GCGATATCGA GCAGAGTGTG GCGCATACCA TGGTTTCTCT GTCGGTGCTT ATCGATTTGC CCGACGGCAT GCGCGACCAG AAGCCGTTGC TCAAGGAGTT GCTGTTTCGC GCCAAGGAAC TCGGGCTCGA TCTCGACTTC GAACCGGTCG ACCCGGAATC CTATCGTTTG CGCGAGCCCG GTTGCATGTA TGTCCTGACC ATGCTCGGCT CGGAGGTCAA CGCCGAAGTG CTGACCCGCA TCGGTGCCAC CCTGGCCGCT GCGCAGGTCA ACATCCAGCG TATCAACAAG TTGACCCGTG GACAATTGCG CTGTGTCGAA CTTGTCATCA ATGTGCCCCC GAGCCTCGAC ATCAAGGAGC TGACGAGCGA GTTGCTCAAC GCCGGCGTCG GTCTCGGCAT CGATATCGCC CTGCAGAAGG AAAACCTGCA CCGCCGTGCC AAGCGGCTGG TGGTGCTCGA TATGGATTCG ACCCTGATTC AGGTCGAAGT AATCGACGAG TTGGCGCGGC TGGCCGGCAT CGGTGAGCAG GTGGCGGATA TCACCCATCG GGCCATGAAT GGCGAACTCG ATTTTCAGCA GGCTCTGCGC GAACGGGTGG GGCTGCTCAA AGGGCTTTCG AGTGAGGCCC TGGAGGAAGT CTATCGCGCC TTGCCCTTTA CCCCCGGAGC CAAAAATCTG ATCCGCGTTT TGCGCCAGCT CGGTTTTAAG ACCGCGGTGA TTTCCGGCGG TTTCAGCTTC TTTACCGACC GCCTCAAAGA GGAACTCGGT CTCGACTATG CCTACGCCAA CGACCTTGCC ATCGAAAACG GTCAGGTGAC CGGTGAGGTG CGTGGAACCA TCGTCGATGG ACAACGCAAG GCCGAACTGC TGGAGGAGAT CGCCCGGCGC GAGGGGATTG CCCTGAGTCA GGTCATCGCC ATCGGCGATG GCGCCAACGA CCTGCCCATG ATCGGCAAGG CCGGTTTGGG CGTGGCTTTC AATGCCAAGG CCCGGGTGCG GGAGCAGGCC CAGTATCGGA TCAATCAGCC GAGTCTCGAT TCGATTCTCT ATCTGCTCGG TATCGCCGAG TGGGAAATGG CGGAGCTGGA GGCGTGA
|
Protein sequence | MEDKMVLVTM TGPDQAGIIS AVAGCIAEAG ARIRDIEQSV AHTMVSLSVL IDLPDGMRDQ KPLLKELLFR AKELGLDLDF EPVDPESYRL REPGCMYVLT MLGSEVNAEV LTRIGATLAA AQVNIQRINK LTRGQLRCVE LVINVPPSLD IKELTSELLN AGVGLGIDIA LQKENLHRRA KRLVVLDMDS TLIQVEVIDE LARLAGIGEQ VADITHRAMN GELDFQQALR ERVGLLKGLS SEALEEVYRA LPFTPGAKNL IRVLRQLGFK TAVISGGFSF FTDRLKEELG LDYAYANDLA IENGQVTGEV RGTIVDGQRK AELLEEIARR EGIALSQVIA IGDGANDLPM IGKAGLGVAF NAKARVREQA QYRINQPSLD SILYLLGIAE WEMAELEA
|
| |