| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2234 |
|---|
| Symbol | alr |
|---|
| ID | 3724907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2606300 |
|---|
| End bp | 2607436 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637751835 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_357643 |
|---|
| Protein GI | 77919828 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 86 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATC CCCGGGCGCA TCGCCCCACC CGCGTTGAAA TCGATCTTGA GGCGCTAAAA
CATAACTTTT ACCAGGCTCA ACGGCTGGCA GGACCGGGGC AGGGTGTCCT GGCCGTGGTC
AAGGCGGATG CCTACGGTCA TGGCGCGGCG CATGTTGCCA TGGCCTTGCA GGGTGTCGGG
GTGGAGATGT TCGGCGTGGC CATTGTGGAG GAAGGCGTTG CCTTGCGCGA GGCGGGAGTC
GTTTGTCCTA TCCTGGTGCT TGGCGGCCTT TATCCCGGCC AGGAGGAAAA TCTGCTGCGC
TACGGTCTGG TGCCGACTCT TTTCGATATG GACGTCGCCC GGCGGCTGGA CAGCTGTGCG
CGGGCGGCCG GTGTGGTTCT GCCTTATCAT ATGAAGGTCG ATACCGGTAT GAGTCGCGTC
GGTTTCCGGC CGGATGATCT GCCCCGGGTG CTGGAAGAAC TGGGTGCGCT TTCGGGGTTG
CGCATGGATG GACTGTTCTC CCATCTGGCT ATGGCTGATG AGCCGGAAAA TACGGTTAAT
CAGAAGCAGC TTGAGATCTT CCGGGGCTGC CTTGACCGAG TCAGGCAGGC CGGTTTTGCG
CCGCGGTATG TGCACTTGAG CAACAGTGCC GCATTGTTGA CGAGGGAAGT GCCCGAATGC
AATTTGTCGC GCCCCGGTAT CCTGCTTTAC GGTGCTTTGC CCAGTCCGGC TTTTGCCGGG
CGGTTCGATT TGAAGCCGGT GATGAGTTTT CGCACCCGTA TTGCACAGAT CCGCAAGGTG
CCGGAAGGCA CAGGGGTTTC TTATGGGCAT CGTTTCGTGG CTGAACGCCC GACGGTACTG
GCGGTTATTC CGGTGGGATA TGCCGATGGC TACAGCCGAC AGCTTTCCAA TGTCGGCGAA
ATGTTGGTGC GCGGTCAGCG TGCCCGGGTC GCCGGGACGG TCTGTATGGA CTGGACCATG
ATCGATGTGA CGGATATCCC TGACGTGGCC GTTGGCGATG AGGTTACCCT GCTTGGTTGC
GACAACGGTC AATGCATCAC CGCTGATGAA TGGGCCGAGC GCATCGGGAC CATCAGTTAC
GAAGTGTTCT GCCAGTTCAG TAAGCGCGTG CCGCGCCTGA CCAACGATCG CCGGTGA
|
|---|
| Protein sequence | MNDPRAHRPT RVEIDLEALK HNFYQAQRLA GPGQGVLAVV KADAYGHGAA HVAMALQGVG
VEMFGVAIVE EGVALREAGV VCPILVLGGL YPGQEENLLR YGLVPTLFDM DVARRLDSCA
RAAGVVLPYH MKVDTGMSRV GFRPDDLPRV LEELGALSGL RMDGLFSHLA MADEPENTVN
QKQLEIFRGC LDRVRQAGFA PRYVHLSNSA ALLTREVPEC NLSRPGILLY GALPSPAFAG
RFDLKPVMSF RTRIAQIRKV PEGTGVSYGH RFVAERPTVL AVIPVGYADG YSRQLSNVGE
MLVRGQRARV AGTVCMDWTM IDVTDIPDVA VGDEVTLLGC DNGQCITADE WAERIGTISY
EVFCQFSKRV PRLTNDRR
|
|---|
| |