Gene Pcar_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2175 
Symbol 
ID3724867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2539425 
End bp2541482 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content54% 
IMG OID637751776 
ProductNADH oxidase 
Protein accessionYP_357584 
Protein GI77919769 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT ATCCGAACAT TTTTGAACCG CTGACCGTAA AGCGCATGAC GATCAAAAAT 
CGCATTGTGA TGCCGCCCAT CGGGACCAAT CTGGCCGGCC TCGACGGCAA GTTCAACACG
GAACATATTG CATATTACGT GCAACGTGCC AAAGGTGGCA CCGGGCTGAT CACGGTGGAA
AACGCCTGTC TCGATTTTCC CCTGGGCACC AACGGTACCA CTCAGTTGCG CATCGACAAC
GATCAGTACA TTCCCGGGTT GTATAAACTG ACCGAAGCGC TGCATGCGTA CGGCGCCTGC
GTATCCATTC AGCTCAACCA TGCCGGGGCC TCCGCCTATC CTGGCCGCCT CAATGGTATG
CAGCAGGTTT CTTCCTCCAA TATTCCTTCC AAAACCGGAG GGTCGGTGCC GCGTTCGCTG
ACCAAGGATG AAATATATGC CATCGTCAGA AAATTTGGCG AGGCCGCCGG TCGTGCCCAG
CGCGCCGAGT TCGATTGCGT TGAAATTCAT GCCGGGCATT CGTATCTGCT CAGTCAGTTC
CTGTCGCCGA TTTATAACAA ACGTACCGAT GAGTTCGGCG GAAGCCCGGA AAATCGCGCC
CGTTTTGCCC GCCTGGTTAT TGACGAAGTG CGTTCGGTGG TTGGGCCTTT CTTCCCTATC
GGTCTGCGTT TCAGTGCGGA TGAATTCATG GAGGGTGGAA ACACCCTGGA AGACACCCTG
AGAAATCTGG AGTATCTGTC CGAGGGGGTC GACATTTTCA ACGTGTCTGC CGCTCTGAAT
GACACTCTGC AGTTCCAGAT CGACGAAATG AACCTGGCCG ATGGTTGGCG TTCCTATATG
GCAAAAGCGG TCAGGGAAAA GTTCGGCAAG GTGACCATCA CCTCGGGCAA TATCAGGGAT
CCGCGTGTTG CCGAAAAAAT TCTGGCCGAT GGCGAGGCCG ATCTGATTGC CATGGGACGC
GGATTGATTG CCGATCCGAA CTGGGTCGAA AAGGTCGAGC ACGGCCACGA ACACCTGTTG
CGCAAATGCA TCTCCTGCAA TATCGGCTGT GCCGATCATC GCATCGCCAA ATCGGAGCCG
ATTCGCTGTA CCATCAATCC CGATGTTGTT TCGGAAGATG CCTACAAGCA GAAGCAAGTC
AAGCATCCCA TGAATGTCGT CGTCATCGGC GGTGGCACCG CGGGGCTGGA GGCGGCATGC
ACCGCTGCGG AAGTCGGATG CGATGTCCAT TTGTTTGAAT CAAAAGATTA CCTGGGCGGT
CTGGCTCGCG AGATTGCCAG GCTTCCCGAT AAGAATCGCA TCAACGATTT TCCCGATTAC
CTGATTGAAC GGGCCAAGAC TCTGGATAAT CTGCACATCG CCACCGGTAC CAAAGCGGAC
GTAAAGACTA TTGATGCCCT GCAGCCCGAT ATCGTCGTGA ATGCCACCGG AGCTAAGCCT
TTGTTGCCGC CGATTAAAGG GTTGCATGAA GAAATGGGCC GTGAAAACAG TAAGGTGTTT
TCGATTTTCG ACCTGCTTGG GGATATGGAC AGGTGGAACG ATATGGTGGG TAAAAACATC
GCCGTTATCG GCGGTGGAGC CGTCGGCCTG GATGTCGTGG AGTTCTTCGT CAAACGGGGG
GCCGCCAAGG TTTCCATCGT GGAAATGATG CCTATGCTCG GCAAGGACCT TGATCTGATC
ACCAGGCTCT CCATGATGAA CATGGTGAAA GAGTATGGTG TCGAGGTCCA CACCAACACG
GCTTTGACGG AAATTGCGGC CGATCATTTC AAACTCAAAC ATGCCGGGGT GGATGCGGAT
ATGCCTTTCG CCGGAGCAGA ATTTGACCTT CCCTTCGATT ACGGTTTTGT CTGCCTGGGC
ATGCGCGCCG ATCAATCTCT CTGGCCGGAT CTGCTGTCCT ACAAGCGGGA AACCGGAGTG
GAAGTCGTCA ATATCGGCGA TGGTAAAATC GCCAGAAGAA TTATCAATGG AACCAAAGAA
GGAAGGGATA TTCTTACCAC CATTGCCAAG GTCGATCAGG CAAAGGATAA ATATACCCCA
CGCGCGGCCA ATGATTGA
 
Protein sequence
MKNYPNIFEP LTVKRMTIKN RIVMPPIGTN LAGLDGKFNT EHIAYYVQRA KGGTGLITVE 
NACLDFPLGT NGTTQLRIDN DQYIPGLYKL TEALHAYGAC VSIQLNHAGA SAYPGRLNGM
QQVSSSNIPS KTGGSVPRSL TKDEIYAIVR KFGEAAGRAQ RAEFDCVEIH AGHSYLLSQF
LSPIYNKRTD EFGGSPENRA RFARLVIDEV RSVVGPFFPI GLRFSADEFM EGGNTLEDTL
RNLEYLSEGV DIFNVSAALN DTLQFQIDEM NLADGWRSYM AKAVREKFGK VTITSGNIRD
PRVAEKILAD GEADLIAMGR GLIADPNWVE KVEHGHEHLL RKCISCNIGC ADHRIAKSEP
IRCTINPDVV SEDAYKQKQV KHPMNVVVIG GGTAGLEAAC TAAEVGCDVH LFESKDYLGG
LAREIARLPD KNRINDFPDY LIERAKTLDN LHIATGTKAD VKTIDALQPD IVVNATGAKP
LLPPIKGLHE EMGRENSKVF SIFDLLGDMD RWNDMVGKNI AVIGGGAVGL DVVEFFVKRG
AAKVSIVEMM PMLGKDLDLI TRLSMMNMVK EYGVEVHTNT ALTEIAADHF KLKHAGVDAD
MPFAGAEFDL PFDYGFVCLG MRADQSLWPD LLSYKRETGV EVVNIGDGKI ARRIINGTKE
GRDILTTIAK VDQAKDKYTP RAAND