Gene Pcar_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2173 
Symbol 
ID3724865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2536766 
End bp2538415 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content59% 
IMG OID637751774 
ProductABC-type transport system, ATPase component 
Protein accessionYP_357582 
Protein GI77919767 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones86 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCACG TTACCAATAT TTCCAAACAG TACGGCTCGC AGGTTCTTTT TCAAGGGGCC 
AGTTTTCAAC TTCCCGCCGG TACGCGCACC GGTCTGGTCG GCCCCAACGG TGCCGGCAAG
ACCTCCATTT TCCGGTTGGT AACCGGCGAG GAGACGGCGG ACAGCGGCGA TATTGCCTGC
GCAAAAAAAA CCGTCATCGG CTATTTTTCC CAGGATATCG GCGAAATGGC CGGCCGCTCG
GCCCTTGCGG AGGTCATGTC CGCCTCGGCC CGCACCATCG AACTCGGTGA GCAGATTCGC
GATATGGAAG CCGCCATGTG CGAACCGATG GAGGACGATG CACTGGCTGC GCTTCTTGAA
CGTTACGGCG ACGCCCAGGA AGAATTCGAG CATCGCGGCG GTTACGATCT CGAAAGCCGC
GCCCAGGCGG TTCTAACGGG TCTCGGTATC GACCCGGAGG CCCAGGCCCG CCCGGTGGAA
ACCTTCAGCG GCGGTTGGAA GATGCGTATC GCTCTGGCCA AAATCCTGAC CCTGAACCCC
GACGTGCTGT TGCTCGACGA ACCGACCAAC CACCTCGATG TCGAATCCAT CATCTGGCTG
GAAAACTGGT TATCCGAGGA CTACCAGGGG GCGGTGCTGT TGACCAGCCA TGACCGCGAC
TTCATGAACC GTCTGGTGAC ACGCATCATT GAGGTCGGCA ACCAGACCGT CACCACCTAC
GGCGGCAATT ACGATTTTTA CCTGCGGGAG CGACAGATCC GCCGCGAACA ACTGATGGCC
AGCTACCGAC GCCAGCAGGA AATGCTGGCC AAGGAAGAAG AGTTCATTGC CCGCTTTGCC
GCCCGCGCCT CGCATGCGGC CCAGGTGCAG TCGCGGGTCA AAAAACTCGA AAAGATCGAA
CGCATCACCT TGCCGCCCGA GCAGAAAGTC ATGCGTTTCG AATTCGCCGA ACCGCCGCGC
AGCGGTGACG ACGTGGTGGC CATGCAGGAT CTGGCCAAGA CCTGGAAAAC CCCGGAAGGC
GGGGAAAAAC ATGTTTTCAG CGGCGTTTCG GGACTGATCC GGCGTGGCGA AAAAGTCGCC
GTGGTGGGCG TCAACGGTGC CGGCAAATCG ACCTTTCTCA AGGTGCTGGC CGAACAGACC
GACCCCACCT CGGGCACGGT AACCATTGGC GCCAACGTAC ATCCGGGCTA TTTCAGCCAG
CACTCCATGG ACATCCTCGA CCCTCAAAAA ACCGTATTCG AAACGATCAG CGAAGCACTG
CCCATGGCCA CCGTCGGCGT GGTGCGCAAC CTTTGCGCCG CGTTTCTGTT CCAGGGGGAC
GATGTCGAAA AACGCATCGG CATCCTGTCC GGGGGAGAAA AAAGTCGCGT TGTGCTGGCA
ACCCTTCTGG CCAGACCGAT CAATTTTTTA ATTCTCGACG AACCGACCAA CCACCTGGAC
ATCGTCTCCC GCGAAATTCT GCTCGATGCC CTGAAAGAAT TTGCCGGCAC AGTGGTGCTG
GTCAGCCATG ACCGACACTT TCTGCGTTGT CTGGTCAACC GCGTTCTGGA AGTCGACCAC
GGCCGGATGC TAGCCTACGA AGGCGATTAC GATTATTACC TGCACAAATC GGGACGCGAC
CCCCTGCACA ACCCCACCGC CCAGCCTTGA
 
Protein sequence
MIHVTNISKQ YGSQVLFQGA SFQLPAGTRT GLVGPNGAGK TSIFRLVTGE ETADSGDIAC 
AKKTVIGYFS QDIGEMAGRS ALAEVMSASA RTIELGEQIR DMEAAMCEPM EDDALAALLE
RYGDAQEEFE HRGGYDLESR AQAVLTGLGI DPEAQARPVE TFSGGWKMRI ALAKILTLNP
DVLLLDEPTN HLDVESIIWL ENWLSEDYQG AVLLTSHDRD FMNRLVTRII EVGNQTVTTY
GGNYDFYLRE RQIRREQLMA SYRRQQEMLA KEEEFIARFA ARASHAAQVQ SRVKKLEKIE
RITLPPEQKV MRFEFAEPPR SGDDVVAMQD LAKTWKTPEG GEKHVFSGVS GLIRRGEKVA
VVGVNGAGKS TFLKVLAEQT DPTSGTVTIG ANVHPGYFSQ HSMDILDPQK TVFETISEAL
PMATVGVVRN LCAAFLFQGD DVEKRIGILS GGEKSRVVLA TLLARPINFL ILDEPTNHLD
IVSREILLDA LKEFAGTVVL VSHDRHFLRC LVNRVLEVDH GRMLAYEGDY DYYLHKSGRD
PLHNPTAQP