Gene Pcar_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2153 
Symbol 
ID3724845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2507836 
End bp2509185 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content50% 
IMG OID637751754 
Producthypothetical protein 
Protein accessionYP_357562 
Protein GI77919747 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA TCGCTCCGTT CAGGGCCGTT CGCTATAATC TTGAGAAAAT CCAGGATCCT 
ACCCGCGTTA CGGCACCACC GTATGATGTC ATTTCTTCGC AGTTGCAGGA GGAGTTGTAT
CAGCGCAGTC CGTTTAACCT GGTTCGCCTT ATTTTGGGCA AAATCGAAGA GGGCGATAAC
GAGGGCTGTA ACCGTTATGT GCGTGCGGCA GGTTTGTTTC GGCAGTGGAT GACGGACGAT
ATTCTCGTCA GGGATATGCA GCCATCCATT TATCTCTACG ATGAGGAATA TCAGGCCGAG
GGATTGGGGG CGGTGGTGCG CAAAGGATTC ATGGCTCTGG CGCGCCTGGA GGATTTTGCA
ACCGGCATGG TCAAACCCCA TGAAAAAACC CTCTCTGGCC CCAAGGCTGA TCGGTTGCAG
TTGACCAAAG CCTGCGAAGC CAACTTCAGC CCCATTTTCG GTCTGTATTC CGATCCATGT
TGCGTGCAGG AGGCCCTGAC CTGGGAATTG AAAAAGCGGA CTCCCGATCT TGAAGTCACC
GATGACGACG GGGTCATACA CCGTTTATGG CAAGTGACTG ACGACACCGT TATTCAAAAG
GTCTGCGAAT TACTGGAAAA CAAACCTGTA TTTATTGCCG ATGGTCACCA TCGTTACGAG
ACCGCTTTGA ATTACCGCGA TTTCAGGCGG GGACAGTGCG ACGATTTCAG CGGCAAGGAA
CTGTTTAATT ACGTTTTGAT GTACTTTGCC AACATGGAAG ACCAGGGGAT GTTGATCTTT
CCCACGCATC GCCTGGTGTA TGGATTGCAA TCTTTCAGGT TGGAACCGTT TCTTTCCGAA
TTAAGCGATT ATTTTGAGGT CGAGGCTCAC TCCATGGATC CGAATGATGC CGAATCCAGG
CGCGAGGTGC GTAACATCCT TCAGAAAAAA GGGGAGGCCC GACCCTCTGT GGGGCTTTTT
GCGGGCGGAC GGACTACATA CTTTCTAACC CTCAAGGATG AACACTGCAT GGACGCTTTT
TTTGATGAAA AGGCTTCCAA GGCACTGCGC ACTCTCGATG TGTCGATACT GCACCGCCTG
GTCTTGGAAA AGATGCTTCA TATAACCCCG GAAGCCCAGG AACAGCAGAC CAACCTTAAA
TACATTAAAA ATTTTGACGA GCCGTTCTCT CTGGTACAAT CGGGACAGTA TCAAATGGCG
TTCCTGATGA ACTCCACACG AATGACCCAG GTCCGGGATG TGGCCAATGC CGGCGAAAAA
ATGCCGCAGA AATCGACTTA TTTTTATCCC AAGCTGCTCA GTGGTCTGGT GATAAATCAG
ATTGCTCGTG ACGAGATGGT TGAGGATTGA
 
Protein sequence
MAKIAPFRAV RYNLEKIQDP TRVTAPPYDV ISSQLQEELY QRSPFNLVRL ILGKIEEGDN 
EGCNRYVRAA GLFRQWMTDD ILVRDMQPSI YLYDEEYQAE GLGAVVRKGF MALARLEDFA
TGMVKPHEKT LSGPKADRLQ LTKACEANFS PIFGLYSDPC CVQEALTWEL KKRTPDLEVT
DDDGVIHRLW QVTDDTVIQK VCELLENKPV FIADGHHRYE TALNYRDFRR GQCDDFSGKE
LFNYVLMYFA NMEDQGMLIF PTHRLVYGLQ SFRLEPFLSE LSDYFEVEAH SMDPNDAESR
REVRNILQKK GEARPSVGLF AGGRTTYFLT LKDEHCMDAF FDEKASKALR TLDVSILHRL
VLEKMLHITP EAQEQQTNLK YIKNFDEPFS LVQSGQYQMA FLMNSTRMTQ VRDVANAGEK
MPQKSTYFYP KLLSGLVINQ IARDEMVED