| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2150 |
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| Symbol | |
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| ID | 3724842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2503743 |
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| End bp | 2504594 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751751 |
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| Product | shikimate 5-dehydrogenase-like oxidoreductase |
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| Protein accession | YP_357559 |
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| Protein GI | 77919744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.411469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAC GCGGCACCAC GCAGGTTTTC GGTATTTTCG GTCATCCGGT CGAACATTCC
TTGTCTCCGA TTATGCAGAA CGCCGCTTTT CAGGCGCTTG GCATGAATGC CGTTTATGTG
CCTTTTCCCG TTGCACCGGA AAAGCTTGCC GATGCAGTGG ATGGAGTGCG TGCGCTGGGG
ATTCGGGGGG TGAATGTCAC GATTCCCCAT AAAGAGAAAA TCATTGAGTT TCTCGATGAG
CTCGATCGAA AAGCGCGCAT GATCGGGGCG GTGAATACCG TCGTCAATAA GGATGGCTAT
TTGATCGGTT ATAATACGGA CGAGACCGGT CTCATAAAGT CGCTGGCCAG GGATCTGGAT
TTTTGTCCCA AGGGGAGGCG CATTCTGATG CTCGGCGCCG GCGGCGCCGG TCGCGCCGCG
TTGGTGGCCC TGGCGGAAAT GGGAGCCCGC TGGATTGGTA TCGTCAATCG TACCCGGGAA
AAAGCCGAAG ATCTTGCACG GTCTTTTCGA GACAGCTTTC CGGGAACGAT TTTTGCTGTG
GTAGGCCTGG ATGAAACGGA ACTGGCGGAG GTCTGCCCAT CCGTCGACCT GGTTCTCAAC
AGCTCGGCCG TTGGCATGAA GGGGGAGGTC TTTACGCAAA TACCATGGTC GCGGCTCAAT
CGTAGTGCCG TTGTCTATGA TATCGTGTAC CGGACCCCGG TAACCCCTCT GGTGACCACG
GCTCGCGAAT ATGGATATCG GGCGGCAGAC GGTTTGGGTA TGCTCATTGC TCAAGGGGAA
GATGCTTTCC GCATCTGGAC CGGACAGGAT CCCCCTGAAG GCGCCATGCA GCGGGCGCTT
GGTCTGCCAT GA
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| Protein sequence | MILRGTTQVF GIFGHPVEHS LSPIMQNAAF QALGMNAVYV PFPVAPEKLA DAVDGVRALG
IRGVNVTIPH KEKIIEFLDE LDRKARMIGA VNTVVNKDGY LIGYNTDETG LIKSLARDLD
FCPKGRRILM LGAGGAGRAA LVALAEMGAR WIGIVNRTRE KAEDLARSFR DSFPGTIFAV
VGLDETELAE VCPSVDLVLN SSAVGMKGEV FTQIPWSRLN RSAVVYDIVY RTPVTPLVTT
AREYGYRAAD GLGMLIAQGE DAFRIWTGQD PPEGAMQRAL GLP
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