| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2079 |
|---|
| Symbol | |
|---|
| ID | 3724770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2422950 |
|---|
| End bp | 2423960 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637751680 |
|---|
| Product | MoaA/NifB/PqqE family Fe-S oxidoreductase |
|---|
| Protein accession | YP_357489 |
|---|
| Protein GI | 77919674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGTTC CTTTTATTCA AAAGGCGCGC ATTGGCGCTT ATATCTGCAA GCAGTTGGTG
AAAGGCAATC GCCGTTTTCC CTTGGTTCTG ATGCTGGAGC CTCTTTTTCA ATGCAATTTA
CGCTGCAAGG GGTGCGGCAA GATTTCGCAT CCGCCCGAGG TGATGAAGCG GCGCCTGACA
GTCGAGGAAT GCGTGGCCAA GGCCGAAGAA TGCGGAGCCC CCATCGTTTC GCTGCCGGGT
GGCGAACCTT TGATGCACCC CGAAATTCAT GTGATTGCCC GTGAGTTGAT CGCCCGCAAG
CGTTTCGTCT ATCTGTGTAC CAATGCATTG TTGGTGGAAA AACGTTTGCA GGACTTTGAA
CCGTCCCCTT ACCTGACCTT CAACGTGCAT CTCGATGGTT TGCGGGATAA ACACGATGCC
CTGGTTAATC GCAAGGGAGT TTTCGATCAG GCCGTGCAAT CCATCCGGAG GCTGGTTTCG
GAAGGGTACA GGGTCACCAC CAATACTACC TTTTTCGGAG ATGAAACTCC GGAAAGCGCC
GCAGCGTTGT TCGATTTTCT CATGTCTCTC GGCGTCGAGG GCATGACCAT CGCTCCCGCA
TTTAACTACG AAAGCGCCGA AGAACAGGAT AATTTTCTGG GTCGCGAGGG GAGCTACAAA
CTGTTTCAGG CGGTATTGCC ACAGGCCAAA GCCCGCGGTT GGCGCTTCAA TCATAGTAGC
CTTTATCTCG ATTTTCTTGC CGGCGGTCAA ACCTATGCGT GTTCGCCGTG GGGTACCCCG
GCAGCCAATA TCTTCGGCTG GCAACGTCCC TGTTATCTGC TCAATGACGG CTATGTCGAT
ACCTTCGATG CGCTGATCAA AGAAACCGAC TGGGATAGCT ATGGAACCGG GCGGGATGCA
CGCTGTGCCG ATTGTATGGT ACACTGCGGG TTCGAGACGA GTGCTGTGGT CGATGCGGCC
ACTCATCCGT TCAAGGCCTT TCGGGTTTTT ATGCGCGGGG CCGGTAACTG A
|
|---|
| Protein sequence | MGVPFIQKAR IGAYICKQLV KGNRRFPLVL MLEPLFQCNL RCKGCGKISH PPEVMKRRLT
VEECVAKAEE CGAPIVSLPG GEPLMHPEIH VIARELIARK RFVYLCTNAL LVEKRLQDFE
PSPYLTFNVH LDGLRDKHDA LVNRKGVFDQ AVQSIRRLVS EGYRVTTNTT FFGDETPESA
AALFDFLMSL GVEGMTIAPA FNYESAEEQD NFLGREGSYK LFQAVLPQAK ARGWRFNHSS
LYLDFLAGGQ TYACSPWGTP AANIFGWQRP CYLLNDGYVD TFDALIKETD WDSYGTGRDA
RCADCMVHCG FETSAVVDAA THPFKAFRVF MRGAGN
|
|---|
| |