Gene Pcar_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2068 
Symbol 
ID3724759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2408176 
End bp2408961 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID637751669 
Productputative L-2,3-butanediol dehydrogenase 
Protein accessionYP_357478 
Protein GI77919663 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR02415] acetoin reductases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.000343042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCACT TTAGATTACA AGGCACAACG GCAATTGTAA CAGGGGCTGG TCGTGGTGTA 
GGACGTGGTA TTGCCATCAG GCTTGCAAAA GACGGAGCGG ATGTGGTGGT CAGCGATATC
GATTCCGAAG ATGTTGATAA GGTTGTGAAG GAAGTTGAGG CTTGTGGACG CAAGTCACTG
GGGATCGTTG CGGATGTGAC CAAGCGTAAA GAAGTATATG ACATGGTTGA CGAGGTTGTC
GATGAGTTTG GACAACTTGA CGCTATGGTG GCCAACGCTG GAATCGCCCA GGTAAAATCA
GCTCTTGAGT TGACGGATGA AGACTGGGAC AACATCTTTG CCGTTAACGT TAAAGGCGTA
TTTCTATGCA ATCAAGCTGC TGCAAAGCAG ATGGTGGAGC AAAAAAGTGG AAAGATCATC
AACTGCGCAT GCATTGCAGC ACATACGGGG CTCGCTATGT TGTCACATTA TACCGCCACC
AAATTTGCCG TGCGTGGATT TACTCAAGCC TTAGCTAAAG AATTGAGGCC TTTTGGCGTT
CAGGTAAATG CATACTGCCC TGGTATCGTA GAAACTGCCA TGTGGGATCT TATCAACCAG
GAAATGGCGA AAGATCTGGA TCTTCCGAAT GCTAAGACTC TGAAACAATA TTCAGAGCTT
ATCTCTGCTG GCCGTGCTGT GACTGCTGAT GATGTAGCAG CCTTTGTGGC CTATCTTGTT
TCGGAGGATT CCGACTATAT GACGGGGCAG TCCGTAATGA TCGATGGCGG GCTTGTCATG
AATTGA
 
Protein sequence
MRHFRLQGTT AIVTGAGRGV GRGIAIRLAK DGADVVVSDI DSEDVDKVVK EVEACGRKSL 
GIVADVTKRK EVYDMVDEVV DEFGQLDAMV ANAGIAQVKS ALELTDEDWD NIFAVNVKGV
FLCNQAAAKQ MVEQKSGKII NCACIAAHTG LAMLSHYTAT KFAVRGFTQA LAKELRPFGV
QVNAYCPGIV ETAMWDLINQ EMAKDLDLPN AKTLKQYSEL ISAGRAVTAD DVAAFVAYLV
SEDSDYMTGQ SVMIDGGLVM N