Gene Pcar_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2067 
Symbol 
ID3724758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2407278 
End bp2408075 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content53% 
IMG OID637751668 
Productshort chain dehydrogenase 
Protein accessionYP_357477 
Protein GI77919662 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0338341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCT TGCCTAATCA CACTCGACCG GATACCAACC AAGGAGAAAA TGCAGTGGGT 
TACGATATTA ACAACAAGAC GGTCTTCATC ACCGGAGCCA ATCGGGGTAT CGGCAAAGCC
ATCGCCGAGG AATTCATAAA ACAGGGAGTT GCCAAGGTCT ATGCTGCCGT GCGCAACGTG
GAGAGTGTTG CTCCACTGGT TGCTTTATAC GGAGACAAGG TCGCTCCTAT CAAGGTTGAT
GTGGCGGATG AAGAGACGAT CATCGAGGCG GCTAATGCCG CGCAAGACGT GGATGTCGTG
ATCAACAATG CCGGTGTTTT AAGCATGTCC TCGGTTTTCG ATGAGGGTGC CATGGAGGCA
TTGGCTTTCG AGTTGGATAT CAACCTTTTT GGCCTGATGC GCGTCGCGCG GGCTTTTGCC
CCGGTACTGA AAGCCAACGG CGGTGGCGCG TTTGTACAAC TCAATTCGGT GGGGTCTTTG
AAAACAGTGC CGAATATCGC TACCTACTGT ACCTCCAAGG CCGCTTGCTA TGCGATTACC
CAAGCATTGA GAGAGGCCCT CGTCGCGCAG GGAACCCATG TGGTCAGCGT TCATGCGGGA
CCGATCAATA CGGAGATGCT CAATGATACC GGTTACGGAG AGATCGCGGA GCCGCCGTCG
CTTGTTGCCA ATGGCATCAT CGAGGCATTA AAGAAAGGTG AATTTCATGT TTTCCCCGAT
TCATTGGCCA GGCAGGTCGG TTCCGTTTAT GAAGGTTTTG CGGAGAATGT AATAATGGCT
TCGGTGACTG AAGACTGA
 
Protein sequence
MAGLPNHTRP DTNQGENAVG YDINNKTVFI TGANRGIGKA IAEEFIKQGV AKVYAAVRNV 
ESVAPLVALY GDKVAPIKVD VADEETIIEA ANAAQDVDVV INNAGVLSMS SVFDEGAMEA
LAFELDINLF GLMRVARAFA PVLKANGGGA FVQLNSVGSL KTVPNIATYC TSKAACYAIT
QALREALVAQ GTHVVSVHAG PINTEMLNDT GYGEIAEPPS LVANGIIEAL KKGEFHVFPD
SLARQVGSVY EGFAENVIMA SVTED