Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2013 |
Symbol | |
ID | 3724704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2344281 |
End bp | 2345444 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637751615 |
Product | HD-superfamily hydrolase |
Protein accession | YP_357424 |
Protein GI | 77919609 |
COG category | [R] General function prediction only |
COG ID | [COG3481] Predicted HD-superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00000276986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAG TTTATGCGGG GCACATTAAG GATCGGGATA TAGTGAACGA CTCCTTTCTG GTGCGCGAAA AAATAACCGC CATGGCGCGT AACGGCAAGC CCTATCTGAC CCTCAAGCTG ATGGATCGTA GCGGCGAGGT GGAGGGGCGT GTCTGGGATC GTGTTGAAGA GTTTTCGGGT TGTTTTGACA AGGATGATTT CATCGAGGTG CAGGGCAAGG CCAGTCTGTA TCTCGGTAAA ATGCAGTTGG TTATTCAAAA GCTGAGAAAG GTCGATGATT CGCAGATCGA CCTGGGCGAT TATCTGCCTG TTGCGACGCG TAGCATTGAG GACATGGTGG CGGAACTCAG GGATCAGGTT GCGAGTTTGC AAACACCCTG TTTCAAAGAT CTGATGGAAC TTTTTCTGGC CGATGAAGCT TTTATGCAGG GTTACACAAG CGCCCCGGCT GCCAAGGCCA TTCACCATGT CTATCTCGGG GGGCTGCTCG ATCATTCCTT GTCGGTAGCT CGCCTGGTGG ACGATATTTG CCGTCATTAT CCCACGGTCA ACCGCGACCT GTTGCTTACC GGCGCTTTGC TCCACGATAT CGGCAAGGTG GCGGAGCTGT GCTATGAGCG CGCTTTTGGT TACACCGATG CGGGAAAGCT GCTCGGGCAC ATTACCATCG GTTTTCAGAT GCTGGATAGC AAGTTGGCTG AAATTACCGA TTTCCCCGGC GATTTGGCAC TGCTTCTGAA GCATCTGCTG TTGTCTCATC ACGGGCAGTA CGAATACGGT TCGCCCAAGC GGCCGAAAAC CCTTGAAGCG ATTATTCTCA ATTATCTGGA CGATCTTGAT TCCAAGATCA ACGGCATACA GACCCATATG GATAAAGATC CGGATAACGA GCAGACATGG ACCGGTTATC ATCGCATCTA CGATCGCTAT TTTTACAAAA GCCCCAACGC TTCTGCCAGC CGCGAATGCG ATGCGGCCTG CACATCTACG GCAGCATCGA CATCACCCTC CTCTCGCGAG GTGCCAGCGG CAACCCAAAC CGTGCCGGCA AAGGAGCGAC GGCCTTCCGA AAAGCGCCGT AAGGGATTGA ATTTCACTTT GGGGGACCAG TTGCGCGGGA AGAACCTGGA TCTCTTTGCA TCGGAAGAAA AGGAAGAAAA GTGA
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Protein sequence | MKKVYAGHIK DRDIVNDSFL VREKITAMAR NGKPYLTLKL MDRSGEVEGR VWDRVEEFSG CFDKDDFIEV QGKASLYLGK MQLVIQKLRK VDDSQIDLGD YLPVATRSIE DMVAELRDQV ASLQTPCFKD LMELFLADEA FMQGYTSAPA AKAIHHVYLG GLLDHSLSVA RLVDDICRHY PTVNRDLLLT GALLHDIGKV AELCYERAFG YTDAGKLLGH ITIGFQMLDS KLAEITDFPG DLALLLKHLL LSHHGQYEYG SPKRPKTLEA IILNYLDDLD SKINGIQTHM DKDPDNEQTW TGYHRIYDRY FYKSPNASAS RECDAACTST AASTSPSSRE VPAATQTVPA KERRPSEKRR KGLNFTLGDQ LRGKNLDLFA SEEKEEK
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