Gene Pcar_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2012 
Symbol 
ID3724703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2343643 
End bp2344284 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID637751614 
Producthypothetical protein 
Protein accessionYP_357423 
Protein GI77919608 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0010295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATC TTTGGCAAGC ACATATGGTG ACGGGAGAAC TTGGCGTTAA CTGCTATCTG 
CTGGGGTGTC CGAAGACCCG GCAGGCCGTG GTTATCGATC CCGGCGGCAA CGGTTCCAGT 
ATTCTTGCCG AACTGGAAAA ACAGGGATTT GAGCTTAAGG CCGTGATCAA CACCCACGGT 
CATTTTGATC ACATCGGCGG TAACAAGACA CTCATCGACC AAACCGGTGC CGATCTGTTG 
CTGCATGCCG AGGCCCTGCC CCTGTTGCGA GGTGCCTCCA GTCACGCAGC AAGCTTCGGT 
TGTCGCGCCA TCGATCCCTC GCCGGAGCCG ACCCGGTTGC TGCAGGATGG CGATCGTATC 
GAGGTCGGCA GTATCGTTCT GGAGGTTTTA CATGTGCCGG GGCACTCGCC CGGCAGCGTA 
TGCCTGAAGT GCGGCGAAGC TTTGTTTGCG GGAGATGTGC TGTTTGCCGG TTCCATCGGG 
CGCACCGACC TTCCCGGAGG GGATCACCAC TTGTTGCTCA AGGGATTGCA GAGTCGTGTG 
CTGACTCTTG CCGACAGCGT CAAGGTCTAT CCCGGTCACG GTCCGGCAAC CACGATCGGT 
CACGAGCGTA AGAATAACCC TTATCTGAAT TATTTCGATT AG
 
Protein sequence
MTDLWQAHMV TGELGVNCYL LGCPKTRQAV VIDPGGNGSS ILAELEKQGF ELKAVINTHG 
HFDHIGGNKT LIDQTGADLL LHAEALPLLR GASSHAASFG CRAIDPSPEP TRLLQDGDRI 
EVGSIVLEVL HVPGHSPGSV CLKCGEALFA GDVLFAGSIG RTDLPGGDHH LLLKGLQSRV 
LTLADSVKVY PGHGPATTIG HERKNNPYLN YFD