Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2000 |
Symbol | ychF |
ID | 3724690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2330870 |
End bp | 2331964 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637751601 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_357411 |
Protein GI | 77919596 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0365484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTCA AGTGTGGCAT CGTTGGGTTG CCCAACGTAG GTAAATCGAC TATTTTCAAC GCCATCACCT CGGCAGGGGC CGAATCGGCG AATTACCCCT TCTGTACCAT CGAACCGAAT GTCGGCGTGG TGTCGGTACC CGATCCGCGT CTTGATGTCC TGGCGGATAT CGTGCAACCG CAGCGTGTGC TTCCCACGAC TATTGAGTTT GTCGATATTG CAGGCCTCGT GCGCGGCGCC AGTCAGGGCG AAGGACTGGG CAATCAGTTT CTCGGACATA TCCGTCAGGT CGACGCTATT GCCAATATTG TCCGTTGCTT CGATGATGAT AATGTGGTGC ACGTGGACGG TTCTGTCGAT CCCATGCGCG ATATCGAAGT CATTCAGACC GAACTTAACC TGGCCGACCT GGATACCGTT GAAAAGCGTC TGTTTCGCAT TCAGAAACAA GCCAAGAGCG GCGATAAGGA TATGCTTGCG CAGCAGGAGG TGTTGCTGCG GGTTCGAGAG GTTCTCGATG CCGGCAAACC GGCACGCTCT GCCGGATTGT CGTATGAGGA CCAACGTTTG ATATCAGATC TGCATCTGAT TACCGCCAAG CCCGTGTTGT ATGTGGCCAA TGTCGCCGAA GACGACCTTG AGGGCGAACA TCCGCATGTC GCTCGGGTGC GGGAGTATGC GGCCGAAGAG GGCGCTGAAG TGGTGGCTAT CTGCGGCAAG ATCGAGTCGG AGATAGCAGA GCTGGAAGGG GACGAAAAAC AGGAATTTCT GCAGGAGCTA GGTCTGGGAA GCTCCGGTCT CGATCGTATG ATTCAGGCCG GTTACCAGTT GTTGGGGCTG ATTACCTATT TTACTGCCGG TGTCCAGGAG GTACGTGCCT GGACTGTGCA TAAGGGCGAC CGTGCCCCCC AGGCTGCCGG GGTCATTCAT ACAGATTTTG AAAAAGGCTT TATCCGCGCC GAAGTCATTG CCTACGATGA TTTCGTGGCG TGCCGTGGCG AAAGCGGTGC CAAGGAGAAG GGGCTGCTGC GGCTGGAGGG CAAGGATTAT GTCGTGCAGG ACGGCGATGT CATGCACTTC CGCTTTAACG TTTAG
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Protein sequence | MGFKCGIVGL PNVGKSTIFN AITSAGAESA NYPFCTIEPN VGVVSVPDPR LDVLADIVQP QRVLPTTIEF VDIAGLVRGA SQGEGLGNQF LGHIRQVDAI ANIVRCFDDD NVVHVDGSVD PMRDIEVIQT ELNLADLDTV EKRLFRIQKQ AKSGDKDMLA QQEVLLRVRE VLDAGKPARS AGLSYEDQRL ISDLHLITAK PVLYVANVAE DDLEGEHPHV ARVREYAAEE GAEVVAICGK IESEIAELEG DEKQEFLQEL GLGSSGLDRM IQAGYQLLGL ITYFTAGVQE VRAWTVHKGD RAPQAAGVIH TDFEKGFIRA EVIAYDDFVA CRGESGAKEK GLLRLEGKDY VVQDGDVMHF RFNV
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