Gene Pcar_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1970 
Symbol 
ID3724679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2292599 
End bp2293366 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID637751571 
ProductBaf family transcriptional regulator 
Protein accessionYP_357381 
Protein GI77919566 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGG TTATCGACGT CGGCAATACC AATACCGTTG TTGGACTTTA TGAAGGGCAA 
ACGCTGGCCT ATAATTGGCG TATTACCACC GATAAAGGGC GTACCGGCGA TGAATATGCC
ATGTTGCTGC ACGAATTATT GCGTCTTGCC GGTGTCACCT TCGATCGCAT AGAAGATGTG
ATCGTATCGA GTGTTGTGCC TCCGACGCTC CAGGCCATCG AGTCCCTGTG CCGCAAATAT
GTAGGACGCA GCCCTTATGT GGTCGGTCCG GGGATCAAGA CGGGCATGCC GATTCTTTAT
GAAAACCCCC GTGAGGTGGG GGCTGATCGT ATCGTCAATG CCGTGGCCGC TTTTGCCCGC
TGGCAGCGGA GTTTGATCGT GGTCGATTTC GGTACGGCCA CGACCTTCGA TTACATTAAT
GCCAAGGGGC AGTACCACGG GGGCGCCATC GCTCCCGGGC TGAAGATCAG TGCCGATGCC
TTGTTCGATA AAGCCAGCAA GCTGCCCCGG GTCGAGGTTT CCAGGCCGCC CACGGTGGTC
GCCAAAAATA CCGTCAACAG TATCCAGGCC GGGCTATTTT ACGGTTATGT GGGCTTGGTC
GACGGTATTG TCGAACGTAT GAGAAAAGAA ACCCGTGACG ATCCCCTGGT TGTCGCTACC
GGGGGCCTGG CCACTCTGAT TGCCGACGAA ACCCAAACCA TACATGAGGT GGAAAGCGAT
TTAACTCTGG AAGGATTGCG CATTCTGTAC CTGCGCAACA AGGGGTGA
 
Protein sequence
MLLVIDVGNT NTVVGLYEGQ TLAYNWRITT DKGRTGDEYA MLLHELLRLA GVTFDRIEDV 
IVSSVVPPTL QAIESLCRKY VGRSPYVVGP GIKTGMPILY ENPREVGADR IVNAVAAFAR
WQRSLIVVDF GTATTFDYIN AKGQYHGGAI APGLKISADA LFDKASKLPR VEVSRPPTVV
AKNTVNSIQA GLFYGYVGLV DGIVERMRKE TRDDPLVVAT GGLATLIADE TQTIHEVESD
LTLEGLRILY LRNKG