Gene Pcar_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1953 
Symbol 
ID3724643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2271866 
End bp2272600 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content54% 
IMG OID637751554 
Productcytochrome c biogenesis protein 
Protein accessionYP_357364 
Protein GI77919549 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGGC AAGAAATTAC TTTGTGGATA GCTTTTTCGG CGGGCCTGGC TTCTTTTGTT 
TCGCCCTGTG TATTGCCGCT GATTCCTTCC TTTATCACCT ACATTACCGG TCTCAGCTTC
CAGCAGTTAC AGCAGGCCCA CCCCGGTGGA CGCATCCGTA TGCGGGTGGC TTTGCACTGT
CTGCTGTTTA TCGCCGGCTT CTCCCTTGTG TACACTACCA TGGGGGTTGT GGCCGTAAGT
CTTTTCAGCC TCATGGATGT CGGTTTGTGG TGGATCCAGA AGATCGGTGG TGTGTTGATC
TTCCTGTTCG GGGTGCATCT GACCGGCCTG TTCCATTTTG GCATTCTGCT CGGTGAAAAG
CGTTTGCATC TTCACGCTAA ACCGGCCGGC TATATCGGGT CGTTTCTCGT TGGCCTGGTG
TTTTCCGCGG GATGGACTCC CTGTACCGGA CCAATATTCG GCGCTGTATT GACCATGGCC
GCCGGTTCTT CCGATGATTC CGTGCGCGGC GGGGTGTTGT TGGCGACCTA TTCGGCCGGT
CTCGGATTGC CGTTTTTGCT CTCCGGTCTG CTGTTTCACA GCTTTCTTGG GTTTTTTAAC
CGTTTTCGTA AATATATCCG GCTGGCCGAA TTGGCCACCG GGGTCATGCT CATGGTCGTC
GGCGTCATCC TGTTTTTTGA CTGGTTCATT TTTCTTACCG GCTATCTCTC TCAGTGGCTT
CCGGCCGCTG GATGA
 
Protein sequence
MEGQEITLWI AFSAGLASFV SPCVLPLIPS FITYITGLSF QQLQQAHPGG RIRMRVALHC 
LLFIAGFSLV YTTMGVVAVS LFSLMDVGLW WIQKIGGVLI FLFGVHLTGL FHFGILLGEK
RLHLHAKPAG YIGSFLVGLV FSAGWTPCTG PIFGAVLTMA AGSSDDSVRG GVLLATYSAG
LGLPFLLSGL LFHSFLGFFN RFRKYIRLAE LATGVMLMVV GVILFFDWFI FLTGYLSQWL
PAAG