Gene Pcar_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1923 
Symbol 
ID3724613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2238849 
End bp2239937 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content54% 
IMG OID637751524 
Producthypothetical protein 
Protein accessionYP_357334 
Protein GI77919519 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.24425e-17 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTC TCTACAGCCG CTATATTTTA GCAACTTTTT TCCGACTGTT CGGCTTGGCT 
ATCGGGGCCT TTGCCGGCCT TTATCTACTC GTCGAGTTTT TCGAACGGAT TGACGATTTT
ATCGAGTATC ATGCTTCCGT CACTTTATGC GTAGCGTACT TCCTCAACAA AACCCCTCTG
ATCATTACCC AGGTTGCCCC CCTGGCATGC CTCATGGCGG TTTTCATGAC CCTTGGCGGG
TTCACCCGTT CAGGAGAGCT GGTGGCCATG CATGCCGGCG GCATCAGCCT GGCGAAAATA
GCCGCGCCCA TGCTGCGTAT GGGGCTTTTA TTCTCACTTA TCATACTCGC CGCCAATGAA
GTTATCGTAC CGCCCTCCAT ACAGCGGGCC AGGCATATCC TCACCACCGA AGTAAGAGGA
GGCCCCGCCG TGCATTACAA GCAGGATAAA ATCTGGCTAC GACACAATAG ATCCATCCTC
AACATCCGTC AGATCGAACC GGTACAGCAA ACTTTAAAAG GTATCACGCT GCTGTCTTTT
GATAAAAACT TCCGCATTCA ACAACGCTTT GATGCCGGCA GCGCCGTTTA TAGCGGCGGC
AGGTGGTATT GCCAGGATGC CGTTACCCGT CGATTCGACA CGACATCCGG CAATTTGTTA
ACGGAACAAC GCCTTGCGGA AAAGATAGAG GACCTGCCGG TGGTTCCGGA AGACTTCAAG
GTTCCCGGCA GCAAACGCAA CGAAGATTTG CCCATCAGCG AATTCCATCG CCTGGGGAAA
AAGCTTAAAC GCGAAGGATA CAACCCTACC CGCTTCCAGG TCGACATGCA CGCCCGTATA
GCCGCCCCGT TTGGGTGTCT GATGATGACC TTCCTTGGCA TCCCTTTCGC GATCCGCAAA
GGCCGCGGCG CCAGCATGGC CCTCGGCATC GCCATCAGTG TCGCCATCGG CGCCCTCTAT
TTCATCCTGA ACGCAACCCT GCTGGCCTTT GGCTACTCGG GAACCTTCCC CCCAATCATC
GCCGCATGGA GCGCCAACAT CCTGTTCCTG CTTTTCGGTA CCTGGCTGTT TTTGCATAGC
GAAGGCTGA
 
Protein sequence
MTPLYSRYIL ATFFRLFGLA IGAFAGLYLL VEFFERIDDF IEYHASVTLC VAYFLNKTPL 
IITQVAPLAC LMAVFMTLGG FTRSGELVAM HAGGISLAKI AAPMLRMGLL FSLIILAANE
VIVPPSIQRA RHILTTEVRG GPAVHYKQDK IWLRHNRSIL NIRQIEPVQQ TLKGITLLSF
DKNFRIQQRF DAGSAVYSGG RWYCQDAVTR RFDTTSGNLL TEQRLAEKIE DLPVVPEDFK
VPGSKRNEDL PISEFHRLGK KLKREGYNPT RFQVDMHARI AAPFGCLMMT FLGIPFAIRK
GRGASMALGI AISVAIGALY FILNATLLAF GYSGTFPPII AAWSANILFL LFGTWLFLHS
EG