Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1913 |
Symbol | |
ID | 3724603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2229336 |
End bp | 2230037 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637751514 |
Product | metal-dependent protease |
Protein accession | YP_357324 |
Protein GI | 77919509 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.0333052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCCGT TGATTGTTAC TGTCGATACC TCGACTCCCG CCGGCAGCGT GGCTCTGAGT CGCGGCCCCG AATTGCTGGG TGAGGTGCTG CTGCACCTGC GCGGTACACA TACGGATCGT GTTCTGGGCT CATTGCAATG GCTGCTGGCC GAAGCTCAAG TCAAGTTGGC CGAAGTGGAG GCCTTTGGCG TCGTAGTCGG TCCCGGTTCT TTTACCGGCT TGCGGGTTGG CGTGGCCACC GTTAAGGGAT TGGCTTATGC CTCGGGTGCA TCCGTGGTCG GCGTTTCGTC CCTGGAGACG CTGGCCGCAG CCTGTCCGTC GGCTGCCTAC CCGGTATGCA GTATAATCGA CGCTCGCAAG AGTGAAGTCT ACGCAGCGGT CTTCGATTGT CGCTCCGATA TGCCCGCCGC AGTGACGGAT GAGCAGGTTC TGGCGCCCAA GTCATTGTTG CAGCAGCTGC AAGGCGAGCA TCTGTTTGTC GGCAGCGGAG CACTGTTGTA TCGGGATCTG ATCAGTGCGC AGCTGGGATC GCGCGCCCAT TTTGCACCGA TGGCCGTCAA CCTGCCCCGC GCTTCGAGCG CTGCCGGGTT GGTTTGGGAC CGGCTTCAGG CCGGCAGGAC AACCACGGCC CAGGCCTTAG TGCCGTGCTA TATCCGCGCT TCCGAGGCCG AAATCATGCG TGCATCCCAA AAAAGCTCCT AG
|
Protein sequence | MAPLIVTVDT STPAGSVALS RGPELLGEVL LHLRGTHTDR VLGSLQWLLA EAQVKLAEVE AFGVVVGPGS FTGLRVGVAT VKGLAYASGA SVVGVSSLET LAAACPSAAY PVCSIIDARK SEVYAAVFDC RSDMPAAVTD EQVLAPKSLL QQLQGEHLFV GSGALLYRDL ISAQLGSRAH FAPMAVNLPR ASSAAGLVWD RLQAGRTTTA QALVPCYIRA SEAEIMRASQ KSS
|
| |