Gene Pcar_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1913 
Symbol 
ID3724603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2229336 
End bp2230037 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content61% 
IMG OID637751514 
Productmetal-dependent protease 
Protein accessionYP_357324 
Protein GI77919509 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0333052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCGT TGATTGTTAC TGTCGATACC TCGACTCCCG CCGGCAGCGT GGCTCTGAGT 
CGCGGCCCCG AATTGCTGGG TGAGGTGCTG CTGCACCTGC GCGGTACACA TACGGATCGT
GTTCTGGGCT CATTGCAATG GCTGCTGGCC GAAGCTCAAG TCAAGTTGGC CGAAGTGGAG
GCCTTTGGCG TCGTAGTCGG TCCCGGTTCT TTTACCGGCT TGCGGGTTGG CGTGGCCACC
GTTAAGGGAT TGGCTTATGC CTCGGGTGCA TCCGTGGTCG GCGTTTCGTC CCTGGAGACG
CTGGCCGCAG CCTGTCCGTC GGCTGCCTAC CCGGTATGCA GTATAATCGA CGCTCGCAAG
AGTGAAGTCT ACGCAGCGGT CTTCGATTGT CGCTCCGATA TGCCCGCCGC AGTGACGGAT
GAGCAGGTTC TGGCGCCCAA GTCATTGTTG CAGCAGCTGC AAGGCGAGCA TCTGTTTGTC
GGCAGCGGAG CACTGTTGTA TCGGGATCTG ATCAGTGCGC AGCTGGGATC GCGCGCCCAT
TTTGCACCGA TGGCCGTCAA CCTGCCCCGC GCTTCGAGCG CTGCCGGGTT GGTTTGGGAC
CGGCTTCAGG CCGGCAGGAC AACCACGGCC CAGGCCTTAG TGCCGTGCTA TATCCGCGCT
TCCGAGGCCG AAATCATGCG TGCATCCCAA AAAAGCTCCT AG
 
Protein sequence
MAPLIVTVDT STPAGSVALS RGPELLGEVL LHLRGTHTDR VLGSLQWLLA EAQVKLAEVE 
AFGVVVGPGS FTGLRVGVAT VKGLAYASGA SVVGVSSLET LAAACPSAAY PVCSIIDARK
SEVYAAVFDC RSDMPAAVTD EQVLAPKSLL QQLQGEHLFV GSGALLYRDL ISAQLGSRAH
FAPMAVNLPR ASSAAGLVWD RLQAGRTTTA QALVPCYIRA SEAEIMRASQ KSS