Gene Pcar_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1907 
SymbolleuA 
ID3724597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2221791 
End bp2223332 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content56% 
IMG OID637751508 
Product2-isopropylmalate synthase 
Protein accessionYP_357318 
Protein GI77919503 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAACG TCAAAAGTAT CAAAATTTTC GACACCACCT TGCGCGATGG CGAACAATCG 
CCCGGCGCCA GCATGAATAT CGATGAAAAA CTGCGGATAG CTTCCCAGCT TGCAAAGCTG
AATGTCGATG TTATCGAGGC AGGCTTTCCC ATTGCCTCGG AAGGGGATTT CGCGGCCGTC
AAGCGGATCG CCGAGACCAT CAAAGGGCCG CAGATCGCTG GCCTTTGCCG CGCGGCGGTC
AAGGACATCG ACTGTGCATG GGAGGCCCTC CAATATGCGG GGGAACGCGG GCGTATTCAT
ACCTTCCTGG CTACCAGCGA TATCCATATG AAGTATAAGC TGAAAATGAG CGAGGACCAG
GTTGTCGAAA CCGCCGTAGC CGCCATCAAA CATGCCGGCC GCTACACGGA AAATATCGAA
TTCAGCTGCG AGGATGCCGC CCGCACCCGT CCGGAATTTC TGGCCCGGGT GGTCGAAGCG
GTTATCGCCG CCGGTGCCAA AGTGGTGAAT ATCCCCGATA CGGTCGGGTA CAGTATCCCC
TCCGAATTCG CGGCCCTGAT TCGCGGTCTC AAAAACAACG TACCGAATGT GGACAAAGCC
ATTCTGTCGG TTCACTGCCA TAACGACCTG GGGCTGGCCG TGGCCAATTC GCTGGCCGCT
GTCGAAGCCG GTGCCGAACA GATCGAGTGC ACCATCAACG GGATCGGCGA ACGGGCCGGA
AACTGCTCGT TGGAGGAAGT CGTTATGGCC CTGCGCACCC GGGCCGATAT CCTGCCGTTC
AAGACCGATA TCGTGACCGA GCATCTTTAT GCCAGCAGCA AGCTGTTATC GACCATTACC
GGCATTCAGG TGCAGCCCAA TAAGGCCATC GTCGGTGCCA ATGCCTTCGC CCACGAAGCC
GGGATTCACC AGCACGGCGT TTTGATGGAT AAGTCGACCT ACGAAATCAT GACCCCCGAA
TCGATCGGCC TGACCCAGAA CAAGCTGGTC CTGGGCAAGC ATTCCGGGCG TCACGCTTTC
GGACAGCGTC TGGTTGAGTT GGGATACGAT CTTTCCAAGG AAGATCTGGA TCGGGCCTTT
ACCCGTTTCA AGGCACTTGC CGATCAGAAA AAAGAAATTT TCGACGAAGA TCTCGACGCC
ATTGTGGCCG ACGAAATTAT TCGTATCCCT GAAAAGTACA AGCTGGTGCA GATGGTTACC
AGTTCCGGTT CGTTTGCCGC CCCGATCGCT ACGGTGGCCA TGGAGATTGA CGGCGAAATC
AAAAAGGCGG CTATGATGGG CGGCGGTCCT GTAGACGCCA CCTTCAAAAC CATCAAAAAG
CTGACCGACA GCAAGGCCGA TCTGCTCAGT TTTACCGTGG GGGCTATAAC CGGGGGAACT
GACGCACAAG GTGAATGTAC GGTCCGTTTG GAGCTTGACG GCCGCGAAGT TCTGGGTCAG
GGCGCACATC CCGATATCAT CGTGGCCAGC GCCAAGGCGT ACATCAATGC CCTTAACCGT
TTGGCATTGA TCGTAAAGGC CCGCCCGTCG GCCCATTTTT AA
 
Protein sequence
MENVKSIKIF DTTLRDGEQS PGASMNIDEK LRIASQLAKL NVDVIEAGFP IASEGDFAAV 
KRIAETIKGP QIAGLCRAAV KDIDCAWEAL QYAGERGRIH TFLATSDIHM KYKLKMSEDQ
VVETAVAAIK HAGRYTENIE FSCEDAARTR PEFLARVVEA VIAAGAKVVN IPDTVGYSIP
SEFAALIRGL KNNVPNVDKA ILSVHCHNDL GLAVANSLAA VEAGAEQIEC TINGIGERAG
NCSLEEVVMA LRTRADILPF KTDIVTEHLY ASSKLLSTIT GIQVQPNKAI VGANAFAHEA
GIHQHGVLMD KSTYEIMTPE SIGLTQNKLV LGKHSGRHAF GQRLVELGYD LSKEDLDRAF
TRFKALADQK KEIFDEDLDA IVADEIIRIP EKYKLVQMVT SSGSFAAPIA TVAMEIDGEI
KKAAMMGGGP VDATFKTIKK LTDSKADLLS FTVGAITGGT DAQGECTVRL ELDGREVLGQ
GAHPDIIVAS AKAYINALNR LALIVKARPS AHF