Gene Pcar_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1903 
Symbolasd 
ID3724593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2217466 
End bp2218485 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content55% 
IMG OID637751504 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_357314 
Protein GI77919499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000000116797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGT TGTTTAATGT TGCAGTTGTC GGGGCCACCG GCGCCGTGGG AAATCAGATG 
CTCGAAGTAT TGGCCGAGCG CAATTTCCCC GTTAAGGAGT TGCGGCTGCT GGCCTCCGAA 
CGTTCTGAAG GCAAATTTCT TGAATTCAAG GGCGAGCAAC TCGTGGTGCA GAAGCTTGGC 
AGGGATTCTT TCAAGGATAT CGATATCGCC CTGTTCAGCG CCGGGGGATC CCGTAGTGAG 
GAGTTTTGCC CCATTGCTGC CGCTTCCGGC GCTGTTTGTG TCGATAATTC CAGCGCCTGG 
CGCATGGATC CGGATGTGCC CCTGGTGGTT CCCGAGGTTA ACCCCGCAGA CGTAGCGCTG 
CATACCAATA AAGGGATCAT CGCCAATCCC AACTGTTCCA CCATTCAGAT GATGGTGGCA 
CTGAAGCCGT TGCACGATTA TGCCAAAATC AAGCGTATCG TGGTGTCAAC CTATCAGGCA 
GTCTCCGGTA CCGGCCTCAA CGCCATCGAC GAACTGCGCG TTCAGTCGGG GGAATTGCTT 
AACGGCCGTC CCGCAGAATG TAAGGTGTAT CCTCATCAGA TCGCCTTTAA CTGTCTGCCC 
CATATTGACG TCTTCCTCGA TAACGGCTAT ACCAAGGAAG AGATGAAGAT GGTTAACGAG 
ACGCAGAAGA TTCTGGGTGA CGAATCTTTG CGGGTTACCG CGACAACCGT GCGCGTTCCG 
GTTTTTTACA GCCACAGTGA AGCTGTAAAT ATCGAAACCG AAAAACCGCT GTCCGCGGCC 
AAGGCCCGTG AACTGCTTGC GGCGGCCCCC GGTGTCAAGG TGGTGGATGA TGTGGCCAAT 
CTGGTTTATC CTACGGCCAT CGATGCGGCC GGGCAGGATC TTACCTATGT CGGGCGCATC 
CGGGAAGACG AGTCCATCGA TAACGGTTTG AACCTGTGGG TGGTGGCCGA CAATCTGCGT 
AAGGGAGCAG CTACCAATGC AGTGCAGATA GCCGAATTGC TTGCGGCCAA GTATCTGTGA
 
Protein sequence
MSKLFNVAVV GATGAVGNQM LEVLAERNFP VKELRLLASE RSEGKFLEFK GEQLVVQKLG 
RDSFKDIDIA LFSAGGSRSE EFCPIAAASG AVCVDNSSAW RMDPDVPLVV PEVNPADVAL 
HTNKGIIANP NCSTIQMMVA LKPLHDYAKI KRIVVSTYQA VSGTGLNAID ELRVQSGELL 
NGRPAECKVY PHQIAFNCLP HIDVFLDNGY TKEEMKMVNE TQKILGDESL RVTATTVRVP 
VFYSHSEAVN IETEKPLSAA KARELLAAAP GVKVVDDVAN LVYPTAIDAA GQDLTYVGRI 
REDESIDNGL NLWVVADNLR KGAATNAVQI AELLAAKYL