| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1878 |
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| Symbol | |
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| ID | 3724568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2192138 |
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| End bp | 2193043 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751479 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_357289 |
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| Protein GI | 77919474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0000421798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACTCG ATCAATATCT GGCATCAGCC ATTCCCGATT TTTCGCGTTC TTTTGCGCGT
AAAATTATCG ATTTGGGTGG GGTTCACCTT AATGGTCGGC GTATGCGCAG GAGTTCTTTT
CCCGTACCGG GCCATGCCGC TGTCGAGGTC TATCTGGATC ATCGGGATCT CGATATCTTT
GCCCTTGACG ATGAACATAT TCTTCTGCGC GACAGGTATC TCGTTGTTGT AAACAAGCCC
CCCGGTATTA ACTCCCAGCC GACCCCTGCA CGGTATAAAG GGACACTTTA CGAGGCGTTG
CTGAGGCTGC TCGATGATCC CTATAACAAA GGACGGAAAC CGTCTCTCGG TATGGTCCAG
CGGCTCGATA GGGATACCTC CGGCGTAATG ATTTTTTCCA TTCATGCGCG TGCGCACAAA
TCCTTGTCCG ATATCTTTGC CGCCCGCCGT GTGCAAAAAC ACTATCTTGC CCTGGTCGCA
GGTTGTATGC AGGCCCCCCA AGGAGAATTT CGTTCCCTTC TGGCCCGTCA ACATCGTACC
AACCTTATGA AATCGGTAGC CAGGGGAGGC AAGGAAGCGG TGACTCGGTA CCGTGTCATT
GAAAAATTCG GCGACGCGGA ATTGCTGGAG GTCGAAATAC CCACCGGACG CTCCCACCAG
ATTCGGGTTC ATTTTGCCGA AGCCGGTCAT CCTCTGCTTG GAGATATTCG CTACGGGGGA
CCGGACCGCT GGCGTGGGGT GGATGTTCCG CGTCAGATGT TGCATGCCCG GCGACTTGAA
TTGCTGCATC CAATCAGCAA GGAACCACTG AATATCGAGG CGCCTTTGCC GCAAGACTTT
CTGAAGTTGC TCGAACTCGG GCGATCGCAG CAGACTGCGG CCGATGGTTC GGATGCTATC
GTCTGA
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| Protein sequence | MRLDQYLASA IPDFSRSFAR KIIDLGGVHL NGRRMRRSSF PVPGHAAVEV YLDHRDLDIF
ALDDEHILLR DRYLVVVNKP PGINSQPTPA RYKGTLYEAL LRLLDDPYNK GRKPSLGMVQ
RLDRDTSGVM IFSIHARAHK SLSDIFAARR VQKHYLALVA GCMQAPQGEF RSLLARQHRT
NLMKSVARGG KEAVTRYRVI EKFGDAELLE VEIPTGRSHQ IRVHFAEAGH PLLGDIRYGG
PDRWRGVDVP RQMLHARRLE LLHPISKEPL NIEAPLPQDF LKLLELGRSQ QTAADGSDAI
V
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