| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1865 |
|---|
| Symbol | |
|---|
| ID | 3724555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2179133 |
|---|
| End bp | 2180494 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637751466 |
|---|
| Product | sodium-dependent transporter |
|---|
| Protein accession | YP_357276 |
|---|
| Protein GI | 77919461 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC CTCCCGCTAT GCGAAGTGGC TGGGCCAGCC GGCTCGGTTT TATACTGGCT
GCCGCCGGCA GTGCCATCGG TCTGGGCAAT ATCTGGAAGT TTCCCTATAT TGCCGGTAAG
AACGGCGGCG GCGCTTTTGT GCTCGTGTAT CTGGTCTGCA TCGTGTTGCT CGGACTGCCG
ATCATGGTGG CGGAACTCCT TGTCGGACGG TCCGGTCAGC GTGATGCCGT CGGCTCTTTC
GTTGCCCTGG AGGGGCGCCG CAGCCCTTGG CGCATGGTTG GTTGGGGCAG TGTGGTGGCC
GCTTTTCTGC TCCTGGCCTT TTATTCCGTG GTTGCGGGAT GGAGTTTCGA TTATGTGGTC
AAGGCGGCTT CCGGTGCCTT GCATCGGGGC AGTCCCGAAC ACGTCAGTCA ATTATTTAGG
CAATTAACGG CTTCTCCCGG GCGCGTTTTG TGGTGGCAGG GGGTGTTCAT TCTGGCGACG
GTGGGGATCG TCCTGGGCGG AATCCGCGGC GGAATCGAGC GTTGGAGCAA AATTCTCATG
CCCGGACTGT TCGCTCTGCT GATGGCATTG TTTCTGCACG CCATGTTTTC CGCGGGCGGA
CCGCAGGCGT TGCGCTTCAT GTTTGAGCCG GATTTTTCGC AACTGACTTC CCGTTCCCTG
CTGGAGGCTC TGGGGCATGC GTTTTTTACC CTATCCCTGG GTGCCGGCGT GATGATTACC
TACGGCTCTT ATCTGGATCC GGAGGCGGAT CTGTTCGGTT TGTCCATGCG GATCGCATTG
CTCGATACGC TGGTGGCCCT GCTGGCGTCC CTGACGATTT TTTCTGTGGT CTTTTCTGCC
GGTATGCCCA TTGGGGGCGG GCCGGGCCTG GTTTTTGAAA CACTGCCGAT CCTGTTTATG
CAGTTGCCGT TCGGTCAGTT GTTGGCGGTG GTGTTTTTTC TGCTACTGGC TTTTGCCGCG
TTGACCTCGG GGATTTCCAT GCTGGAGGTG GTGGTCGCCT ATGTTATCGA CGAGTGCCGT
TGGCCGCGCC TGAGGGCCAC CGCTTTTGTC GGCGCCGCCT CATTCGTTCT GGGCATACCC
TGCGCTTTGT CCTTTAATCT CTGGTCGGAT CGGCAGTTGT TGCCAGGGCG CACCGTATTT
CAAACCTTCG ACCTGTTCGT CTCTTCTTAT ATGTTGCCGT TGGGGGGGCT GCTGGTGGCT
CTGTATGTCG GTTGGGTGTG GTCCAGGGAT CAGGAAAGGG AGGCGCTGGC ACATTTGCGA
CACAACGCGG CTATGTTCAA AGTGTGGCAC GTGCTGGTGC GTTACCTGGC ACCGGCGGCA
GTGATTCTGG TGCTGCTTAA CGAAGCCGGG CTGTTTGCCT GA
|
|---|
| Protein sequence | MENPPAMRSG WASRLGFILA AAGSAIGLGN IWKFPYIAGK NGGGAFVLVY LVCIVLLGLP
IMVAELLVGR SGQRDAVGSF VALEGRRSPW RMVGWGSVVA AFLLLAFYSV VAGWSFDYVV
KAASGALHRG SPEHVSQLFR QLTASPGRVL WWQGVFILAT VGIVLGGIRG GIERWSKILM
PGLFALLMAL FLHAMFSAGG PQALRFMFEP DFSQLTSRSL LEALGHAFFT LSLGAGVMIT
YGSYLDPEAD LFGLSMRIAL LDTLVALLAS LTIFSVVFSA GMPIGGGPGL VFETLPILFM
QLPFGQLLAV VFFLLLAFAA LTSGISMLEV VVAYVIDECR WPRLRATAFV GAASFVLGIP
CALSFNLWSD RQLLPGRTVF QTFDLFVSSY MLPLGGLLVA LYVGWVWSRD QEREALAHLR
HNAAMFKVWH VLVRYLAPAA VILVLLNEAG LFA
|
|---|
| |