| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1857 |
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| Symbol | |
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| ID | 3724547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2172082 |
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| End bp | 2173380 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637751458 |
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| Product | putative MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_357268 |
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| Protein GI | 77919453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00000114049 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGGA GCTTTGCCAT TGTCACCTTG GGGTGCAAGA CCAACCAGTT CGAATCGGCG
GCCATGGCCG AACAGCTGGA ACAGGCCGGA TACCGGCGCA TCGATTACAG CGCCGGGGCG
GATCTGGTCA TTGTCAATAC CTGCACCGTA ACGGCGGCCA CCGACAGTCA GTCGCGCAAT
CTCATACGTC GGGCCCGGCG ACTCAACCCC GCTTGCCGGG TGGTTGTGAC GGGCTGTTAT
GCCCAGATCG ATCCGGCAGC CGTGCAAAAT CTGCCGGGGG TCGACAGGGT TCTCGGCAAT
GAAGAAAAGA GCGAACTGCT GCATTGGTTG GACGCTGACG GTCCGAAGGT GCAGGTCGGG
GATATCCGCC AGGCCCGCGG CGTTACCTTT GACCTGAACG CTTTTGGCAG CCGCAGCCGT
GCCTTCGTGC AGATTCAAAA TGGCTGCAAT GCCTTCTGTT CGTATTGCAT TATTCCCCAT
GCACGGGGAC CCAGCCGGTC CGCTTTGCCG CAACAGGTGG TGGACCAGGT GTGCAAGTTC
TGCACCGCCG GTTTTCCCGA GATTGTTTTG ACCGGTATTC ATATCGGCGG TTACGGCAAC
GACCTGCAGC CGCCCCTGAG CCTGGCGGAT CTGGTACGCA GGCTGTTAGA CGACACCCAG
GTCAGCCGCC TGCGACTCGG ATCCATCGAG CCTCAGGAAG TCTCCATGGA ATTGATCGAT
CTGGTGGCCC ACTGTGAGCG GCTTTGTCCG CATTTTCATA TCCCGCTGCA AGCCGGCGAC
GATGCCGTGC TCAAGGCGAT GAATCGCCAT TATTCGGTGA AGGATTTCCG TAATCTGGTG
GAAGGCATCA AGTTGCGGGT GCCGCAGGCC GCCATTGGGC TGGACATCAT TACGGGATTT
CCCGGGGAGA CGGAGAACGC CTTTGCCAAC ACCCTGGCTC TGGTCAGGGA TCTGCCGGTC
ACCCACCTGC ATGTTTTCCC TTTCAGCAAG CGGCCCGGAA CTCCTGCGGC TACCATGCGC
CATCAGATTT CAGGCACCGT TGCGCGGCAA CGTGCTGCCG AACTGCGCGC GCTTGGAGAA
GGGAAACAGG CGGAATACGC CCGAGGCTTT ATCGGGAAGA ACCTGCAGGT CGTGGTCGAA
GGAAGCAAAC AGGGGAGCAA GCGTCACGGT CTGAGCGTGC ATTATCTGCC TGTGGAGTTC
GATACCGACG ATCATTGGAA CCAACGCACG GCCACTGTTT GTGTGGAGAC AACCCGGCAG
GGAACCTTGC TGGGCAAGTT GATCGATGAT GTTGGTTGA
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| Protein sequence | MKGSFAIVTL GCKTNQFESA AMAEQLEQAG YRRIDYSAGA DLVIVNTCTV TAATDSQSRN
LIRRARRLNP ACRVVVTGCY AQIDPAAVQN LPGVDRVLGN EEKSELLHWL DADGPKVQVG
DIRQARGVTF DLNAFGSRSR AFVQIQNGCN AFCSYCIIPH ARGPSRSALP QQVVDQVCKF
CTAGFPEIVL TGIHIGGYGN DLQPPLSLAD LVRRLLDDTQ VSRLRLGSIE PQEVSMELID
LVAHCERLCP HFHIPLQAGD DAVLKAMNRH YSVKDFRNLV EGIKLRVPQA AIGLDIITGF
PGETENAFAN TLALVRDLPV THLHVFPFSK RPGTPAATMR HQISGTVARQ RAAELRALGE
GKQAEYARGF IGKNLQVVVE GSKQGSKRHG LSVHYLPVEF DTDDHWNQRT ATVCVETTRQ
GTLLGKLIDD VG
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