| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1854 |
|---|
| Symbol | |
|---|
| ID | 3724544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2169642 |
|---|
| End bp | 2170964 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637751455 |
|---|
| Product | major facilitator superfamily permease/ BtlA-like |
|---|
| Protein accession | YP_357265 |
|---|
| Protein GI | 77919450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000121925 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACC CCGTAAAGAC CAAACCCGCT CCGACACGCC GGCAGGCCTG GTTTGGCTGG
TGCATGTACG ATTGGGCCAA CTCGGCCTTC GCCACAGTGA TTCTGGCGGC GGTGCTGCCG
GTATATTTCG TTTCGCTGGT CCCCACGGCA GGCGTCACAC TGCCGATAAT CGGAGGCCCG
CTGAGCGCCT CGGCTCTGTG GAGCTATGCC GTGGCGGGAT CCATGACCCT GGTGGCGCTT
GCCGCGCCGG GCCTTGGCGC TATTGCGGAT CGCAGCCGTT GCCGCCGACG CTGGCTGATG
ATCCTCTGCG TTACGGGCGC GTCTGTCACC TGCCTTCTGG CCCTGGCCGG CCCCGGCCGC
TACCTGCTGG CGGCGGGTTT GTTCATGCTG GCCAACGCCT GTTTTGCCAC CGCCAACATT
TTCTACAATG CCTTTTTGCC GGCACTTGCC CAAAACCATG AAATGGACCG CCTGTCGGCC
CGGGGATTCG CCCTGGGCTA CGTTGGCGGC GGCCTGATGC TGCTGCTCAC CTTTTTGCTG
ATCCAACACC ATGACGTGAT GGGTCTGGCA ACCCCCTCGC AAGCCACACG TCTCGGATTT
TTTTTGACCG GGCTTTGGTG GTTGTTCTTC TCCTTGCCGA CGTTTTATTT TCTGCGCGAG
GAAATGATTC CCCTGCCAAG CGTGAAATCG ACCACGGCCA CCGGTCTGCG CGCCATGTGG
CAAGTCTGGA AAGAACTTCG GGACTATCCG GATCTGCTGC GTTTTCTGCT CGCCTACCTG
TTTTACAACG ACGGTATTCA GACCGTCATT GCGGTAGCCG CCATTTTCGG CAAGGATGAA
CTGGGACTGG GTACGACCAG CATTCTCGGC TGTTTTCTCA TGATCCAATT CGTCGCCATG
CCCGGCTCGC TGCTGTTCGC CCGCTTCGCC CACCTGTGGG GCGCCAAAAG AGCTATCCTG
CTGTCCCTGG TTTTATTTAC GGTGGTCACG GTATATGCCT ACGCCATGCA ACAGGCCTGG
CAGTTCTGGC TCATGGGGTT GGTCGTCGCC CTGATCCTGG GCGGTAGTCA GGCCATCAGC
CGCTCCTTGT TCGGAAGTTT GCTGCCACCT GGGAAAAATG CCGAATTCTA CAGTTTTTAT
GCCGTCAGCG GCAAATTCGC CGCCATCCTC GGACCGGTTG CCTTCGGGCT GCTGGCCCAG
ATCACGGGCT CCAACCGCAT GGCGATTCTC GGCCTGGGAC TGTTCTTTGG GGCGGGTTTC
GGCCTGTTGC TCTCCGTCAA CGTGCAACGC GGCCGCGAGG CGGCCCTGGA GAAGACACCA
TGA
|
|---|
| Protein sequence | MPDPVKTKPA PTRRQAWFGW CMYDWANSAF ATVILAAVLP VYFVSLVPTA GVTLPIIGGP
LSASALWSYA VAGSMTLVAL AAPGLGAIAD RSRCRRRWLM ILCVTGASVT CLLALAGPGR
YLLAAGLFML ANACFATANI FYNAFLPALA QNHEMDRLSA RGFALGYVGG GLMLLLTFLL
IQHHDVMGLA TPSQATRLGF FLTGLWWLFF SLPTFYFLRE EMIPLPSVKS TTATGLRAMW
QVWKELRDYP DLLRFLLAYL FYNDGIQTVI AVAAIFGKDE LGLGTTSILG CFLMIQFVAM
PGSLLFARFA HLWGAKRAIL LSLVLFTVVT VYAYAMQQAW QFWLMGLVVA LILGGSQAIS
RSLFGSLLPP GKNAEFYSFY AVSGKFAAIL GPVAFGLLAQ ITGSNRMAIL GLGLFFGAGF
GLLLSVNVQR GREAALEKTP
|
|---|
| |