Gene Pcar_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1803 
Symbol 
ID3724492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2105832 
End bp2107352 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content33% 
IMG OID637751405 
ProductO-antigen and teichoic acid export protein 
Protein accessionYP_357214 
Protein GI77919399 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA ATGGAAGTCT AGTAAGAAAT CTGTCTTTTA ATCTTATAAA CTTTATTCTT 
AATGTTATAG TGGGTATTTT TTATACTCGT TATTTAATTG ATAATCTTGG GGTATCTGGA
TATGGTTTGA TACCTTTATG TGCAACAATA GGTACATATT TTACTGTTTT CGCTCTAGTG
TTCAATGCAG CCGTTGGTAG GTTTATAGCA GTATCAATTG CTAGGGAAGA TTTTAAAGAA
GCTAATATAT ATTTTAATAC TTCATTATTT TCAAGTATTA CTGTTGGGCT TATATTGTTA
TTTCCATGTT TATGGATAGC TTTGACGCCT AGTAGGATGT TAAGTATTCC TATTGGTCAA
GAGATCGAGG CAAGTAAACT TCTTTTATTT ACATCAGGAA TGATTTTTTT TAGTATAATT
TCCGTTCCAT TTGAGGTTTC AACTTACTGT AAAAACCGTT TTGACCTAAG AAATAGTGTT
ATAATAATAA AAACATTGAT TAGGGTTGGA GTTGTAATAG TATTGTTTAC CAACTATAGT
GCAAAAATAT CTTATGTTGG ATTTGGAATG TTTTTGTCTA GTATGGCCTC CTTTCTTATT
TCTTTGTTTG TATGGAAACA CTTAACTCCT GAGTTTTATG TTGATATAAG AGAATATAAT
ATTTCCTCAT TGAAAGAGCT AACAGCTGCA GGTGGTTGGG TATCTGTAAG CCAAGTTGGC
ACCCTTTTGC TATTAAATAT CGATCTATTT TTAATTAATA AGTTATTTGG GGTAGAATCG
GGTGGTATAT ATGCGTCTTT GCTTCAATGG TCTATCCTAT TTAGAAGTCT TGCTCTTACA
ATTGCAGGAG TCTTTGGGCC AACGATAGTT ATACTATATG CTAAAAATGA GATAGAGGAA
TTAATTAAGT ATTCTAGGAA GGCAGTGAAA TATCTTGGGT TGTTTATAGC TCTCCCTATA
GGGTGTGTAA GTGGTTTATC CAGTCCCCTT CTAAAGGTTT GGTTGGGGGC TGGGTTTGTT
GAACATGCTC CCCTCCTTAC CCTTATGACA GCTCCTTTAT GTTTAAACTT AGGATACTCT
CCTCTTCATA ATATTTCAAC TGCAACAAAC AAAGTTAAAA TACCAGGTCT CGTTCAAATA
TTATCTGGAC TTGCTAACCT ATTTCTCGCA ATTCTTTTTT CAGTTCATAT GGGGTTAGGT
TTGTATGGAA TAGCCATAGC TGGGATTTGT GTCTTAACAA TAAGAAATGT TCTTTTTACA
CCATTATATG GATCCCATAT TATCGGACGA CATTACGGTA CATTTATGAG CGAATTATTG
CCAATTGTGA TAATGACTAC CATGTTAACT TTAATATGTT ATTTTGTTTC ATCTATTATT
GATCTTGGAT CTTGGTTTAG GCTGATTCCC TTTTGTTTGT TTGTTTCAAT AATTTATATG
ACTTTTGTAT GGAAAATTTT TGTTACTCAT GAAGAAAAAG AGAGTTTTGC GAAGATGATT
CCAAAATTAA AGAGGGCATG A
 
Protein sequence
MRKNGSLVRN LSFNLINFIL NVIVGIFYTR YLIDNLGVSG YGLIPLCATI GTYFTVFALV 
FNAAVGRFIA VSIAREDFKE ANIYFNTSLF SSITVGLILL FPCLWIALTP SRMLSIPIGQ
EIEASKLLLF TSGMIFFSII SVPFEVSTYC KNRFDLRNSV IIIKTLIRVG VVIVLFTNYS
AKISYVGFGM FLSSMASFLI SLFVWKHLTP EFYVDIREYN ISSLKELTAA GGWVSVSQVG
TLLLLNIDLF LINKLFGVES GGIYASLLQW SILFRSLALT IAGVFGPTIV ILYAKNEIEE
LIKYSRKAVK YLGLFIALPI GCVSGLSSPL LKVWLGAGFV EHAPLLTLMT APLCLNLGYS
PLHNISTATN KVKIPGLVQI LSGLANLFLA ILFSVHMGLG LYGIAIAGIC VLTIRNVLFT
PLYGSHIIGR HYGTFMSELL PIVIMTTMLT LICYFVSSII DLGSWFRLIP FCLFVSIIYM
TFVWKIFVTH EEKESFAKMI PKLKRA