Gene Pcar_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1776 
SymbolaroL 
ID3724465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2078672 
End bp2079184 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content57% 
IMG OID637751380 
Productshikimate kinase II 
Protein accessionYP_357189 
Protein GI77919374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.769228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCA CCATTTACCT GATCGGTGCC CGCGCTTCGG GCAAAACCAC CATCGGCCGC 
GCTCTGGCGA GTGTGCTGAA CTATGCTTTT GTCGATACGG ACGAGTATAT GTCTGCAACG
AGTCACATGA CGGTTGCCGA GGTGGTGGCC AAGGAAGGTT GGGTGGGGTT TCGTCGCAGG
GAAAGCGAAG CCCTGCACGC CGTGACGGCA CCAAAAACCG TGATAGCGAC GGGTGGGGGG
ATGGTCCTGG CTACAGCCAA CCGGAAATAC ATGCGGGCCC ATGGGAAAGT ATTTTATCTG
CATGTCCCGG CCGAGGTTAT GGCGGAACGC CTTAAGGCCG ATCCGAATTC CGCCCAGCGT
CCGACGCTTA CCGGGCGATC GATCGTTGAA GAGATCAATG AAGTGATGGC AGAGCGCGAG
ACTCTATACC ATGAGACGGC GCACTATATT CTCAACGGTT CGGTTCCCGT CGAAAGAGTG
GTCAAGCAGG CCCTGGATAT GCTGGGTGGT TAA
 
Protein sequence
MATTIYLIGA RASGKTTIGR ALASVLNYAF VDTDEYMSAT SHMTVAEVVA KEGWVGFRRR 
ESEALHAVTA PKTVIATGGG MVLATANRKY MRAHGKVFYL HVPAEVMAER LKADPNSAQR
PTLTGRSIVE EINEVMAERE TLYHETAHYI LNGSVPVERV VKQALDMLGG