Gene Pcar_1772 details

Gene Information

• Locus tag: Pcar_1772
• ID: 3724461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2074809
• End bp: 2075255
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637751376
• Product: protein-tyrosine-phosphatase
• Protein accession: YP_357185
• Protein GI: 77919370
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0394] Protein-tyrosine-phosphatase
• TIGRFAM ID: [TIGR02691] arsenate reductase (thioredoxin)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00000000000508591
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAACA AAATCAAGGT GCTCTTCCTG TGCACCGGCA ACTCCTGCCG CAGCCAGATG 
GCGGAAGGAT GGGCACGACA TCTTAAGAGC GATCAGCTGG AAGCCTGGTC GGCAGGAATC 
GAAACCCACG GCCTTAATCC GCGCGCCGTA CAGGTCATGG CCGAAGTCGG GGTTGATATA 
TCCGGCCACG AATCCCAAAA TATCCGCGAC CTTCTCGACA TACCTTTCGA TTACGTCGTC 
ACCGTCTGCG GACATGCCCA TGAAACCTGC CCTATTTTCC CGGGACAGGC CAAGGTGGTA 
CATGTCGGCT TCGACGATCC GCCGAAAATG GCTCAGGAAT GTGGAACGGA GGAAGAACAA 
CTGAACTGCT ACAGGCGGGT CAGGGATGAG ATACGTACGT TTATAGAAAG GCTTCCTGAG 
GCGCTTATGG GCCAGGGGGA GGGATAA 

 

Protein sequence

MPNKIKVLFL CTGNSCRSQM AEGWARHLKS DQLEAWSAGI ETHGLNPRAV QVMAEVGVDI 
SGHESQNIRD LLDIPFDYVV TVCGHAHETC PIFPGQAKVV HVGFDDPPKM AQECGTEEEQ 
LNCYRRVRDE IRTFIERLPE ALMGQGEG