Gene Pcar_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1729 
Symbol 
ID3725930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2022029 
End bp2023186 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content62% 
IMG OID637751333 
Productcysteine desulfurase family protein 
Protein accessionYP_357142 
Protein GI77919327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01977] cysteine desulfurase family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000242055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATCT ATCTCGATAA CGCCGCAACA TCCTTCCCCA AACCCGCATC GGTCTATCAG 
GCGGTCGATG ATGCCCTGCG ACATCGAGGC GGCAGTCCGG GGCGCGGCAG TCATCACATG
GCCCTGGAGG CAGGACGGCT GTTGATGGCA TGCCGCGACA CGGCGGCAGG GTTTTTCGGC
ATTCGCGACA CCTCCCGTGT GGTTTTTACC GGCAATGCCA CCGAAGCCTT GAACCTGGCC
CTGTTCGGCC TGCTTAATCC CGGCGACCGG GTTGTCACCT CGACCATGGA ACACAATGCC
GTACTGTGCC CCCTCCAGGC TCTGCAGACG CGCGGCCTGA AAGTCGTCAA AGTTCCACCG
GGAGCCGACG GCCGCCTGCA TCCGGACTCG GTGCGCGAAG CGGTCATGGT CGATGCAAAA
GCCACCCGCC TGGTGGTCCT CACCCACGCT TCCAATGTCA CCGGGGCTAT CCAACCCATA
GAAGAGATCG GCCCGTGGTG CCGCAGCCTG GGCATCCCGC TGCTGGTCGA TGCGGCGCAG
ACAGCCGGAT ACATCCCTGT CGACGTCGAA GACATGGGCA TCGACCTGCT GGCGGTGCCG
GGACACAAAC ACCTCATGGG GCCACCCGGT TGCGGTTTTC TGTATGTCCG TGAGGGGCTG
CAGCTTACCC CCCTGCTGTA TGGCGGCAGC GGTTCGGATT CGGGCTCGCC GCTACCGCCG
GAGCACATGC CCGAACGCCT GGAAAGCGGC ACCGCCAACC TTCCGGCCCT GGCCGGACTG
AAAGCCGGAA TCGACTTTTT GGAAAAGACT GGTTTTGTAA ATCTGCGCCG TCATAAAAAA
GAACTCATGG CGCACCTCGC AGATGGACTG AGCGCCCTGC CCGGCATTCG CCGTTACGGG
CCCACCGATA TCTCCCTGCT GGCAGGTGCC CTGTCCTTCA ACCTCTCGGG TCTGGATCCT
GCGGAAATCG CTTTCTGGCT CGACAACGAA CACGCCATCT GCGTGCGTGC CGGACTGCAC
TGCGCCCCCG ACACCCATCG CAGCCTGAAT ACTTTCCCCC GCGGCACAGT AAGGGTCAGC
CCCGGCTATT TTTCCCGACA TGAGGATATC CAGGCTCTGA TTCATGCTCT GGAAACCCTC
TCAAACCATG GCAAATAA
 
Protein sequence
MSIYLDNAAT SFPKPASVYQ AVDDALRHRG GSPGRGSHHM ALEAGRLLMA CRDTAAGFFG 
IRDTSRVVFT GNATEALNLA LFGLLNPGDR VVTSTMEHNA VLCPLQALQT RGLKVVKVPP
GADGRLHPDS VREAVMVDAK ATRLVVLTHA SNVTGAIQPI EEIGPWCRSL GIPLLVDAAQ
TAGYIPVDVE DMGIDLLAVP GHKHLMGPPG CGFLYVREGL QLTPLLYGGS GSDSGSPLPP
EHMPERLESG TANLPALAGL KAGIDFLEKT GFVNLRRHKK ELMAHLADGL SALPGIRRYG
PTDISLLAGA LSFNLSGLDP AEIAFWLDNE HAICVRAGLH CAPDTHRSLN TFPRGTVRVS
PGYFSRHEDI QALIHALETL SNHGK