Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1729 |
Symbol | |
ID | 3725930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2022029 |
End bp | 2023186 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637751333 |
Product | cysteine desulfurase family protein |
Protein accession | YP_357142 |
Protein GI | 77919327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000000242055 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATCT ATCTCGATAA CGCCGCAACA TCCTTCCCCA AACCCGCATC GGTCTATCAG GCGGTCGATG ATGCCCTGCG ACATCGAGGC GGCAGTCCGG GGCGCGGCAG TCATCACATG GCCCTGGAGG CAGGACGGCT GTTGATGGCA TGCCGCGACA CGGCGGCAGG GTTTTTCGGC ATTCGCGACA CCTCCCGTGT GGTTTTTACC GGCAATGCCA CCGAAGCCTT GAACCTGGCC CTGTTCGGCC TGCTTAATCC CGGCGACCGG GTTGTCACCT CGACCATGGA ACACAATGCC GTACTGTGCC CCCTCCAGGC TCTGCAGACG CGCGGCCTGA AAGTCGTCAA AGTTCCACCG GGAGCCGACG GCCGCCTGCA TCCGGACTCG GTGCGCGAAG CGGTCATGGT CGATGCAAAA GCCACCCGCC TGGTGGTCCT CACCCACGCT TCCAATGTCA CCGGGGCTAT CCAACCCATA GAAGAGATCG GCCCGTGGTG CCGCAGCCTG GGCATCCCGC TGCTGGTCGA TGCGGCGCAG ACAGCCGGAT ACATCCCTGT CGACGTCGAA GACATGGGCA TCGACCTGCT GGCGGTGCCG GGACACAAAC ACCTCATGGG GCCACCCGGT TGCGGTTTTC TGTATGTCCG TGAGGGGCTG CAGCTTACCC CCCTGCTGTA TGGCGGCAGC GGTTCGGATT CGGGCTCGCC GCTACCGCCG GAGCACATGC CCGAACGCCT GGAAAGCGGC ACCGCCAACC TTCCGGCCCT GGCCGGACTG AAAGCCGGAA TCGACTTTTT GGAAAAGACT GGTTTTGTAA ATCTGCGCCG TCATAAAAAA GAACTCATGG CGCACCTCGC AGATGGACTG AGCGCCCTGC CCGGCATTCG CCGTTACGGG CCCACCGATA TCTCCCTGCT GGCAGGTGCC CTGTCCTTCA ACCTCTCGGG TCTGGATCCT GCGGAAATCG CTTTCTGGCT CGACAACGAA CACGCCATCT GCGTGCGTGC CGGACTGCAC TGCGCCCCCG ACACCCATCG CAGCCTGAAT ACTTTCCCCC GCGGCACAGT AAGGGTCAGC CCCGGCTATT TTTCCCGACA TGAGGATATC CAGGCTCTGA TTCATGCTCT GGAAACCCTC TCAAACCATG GCAAATAA
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Protein sequence | MSIYLDNAAT SFPKPASVYQ AVDDALRHRG GSPGRGSHHM ALEAGRLLMA CRDTAAGFFG IRDTSRVVFT GNATEALNLA LFGLLNPGDR VVTSTMEHNA VLCPLQALQT RGLKVVKVPP GADGRLHPDS VREAVMVDAK ATRLVVLTHA SNVTGAIQPI EEIGPWCRSL GIPLLVDAAQ TAGYIPVDVE DMGIDLLAVP GHKHLMGPPG CGFLYVREGL QLTPLLYGGS GSDSGSPLPP EHMPERLESG TANLPALAGL KAGIDFLEKT GFVNLRRHKK ELMAHLADGL SALPGIRRYG PTDISLLAGA LSFNLSGLDP AEIAFWLDNE HAICVRAGLH CAPDTHRSLN TFPRGTVRVS PGYFSRHEDI QALIHALETL SNHGK
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